Transcription-repair coupling factor
From Proteopedia
| Line 20: | Line 20: | ||
[[2eyq]] – EcTRCF – ''Escherichia coli''<br /> | [[2eyq]] – EcTRCF – ''Escherichia coli''<br /> | ||
| - | [[6x2n]], [[6x2f]], [[6x26]], [[6x50]], [[6x43]], [[6x4w]], [[6x4y]] - EcTRCF, RNA polymerase, RNA, DNA (Cryo EM) /> | + | [[6x2n]], [[6x2f]], [[6x26]], [[6x50]], [[6x43]], [[6x4w]], [[6x4y]] - EcTRCF, RNA polymerase, RNA, DNA (Cryo EM)<br /> |
[[3hjh]] – EcTRCF residues 1-470<br /> | [[3hjh]] – EcTRCF residues 1-470<br /> | ||
[[2b2n]] - EcTRCF residues 1-333<br /> | [[2b2n]] - EcTRCF residues 1-333<br /> | ||
Revision as of 16:19, 15 August 2021
The bacterial transcription-repair coupling factor TRCF, also called Mfd translocase, is a DNA repair protein. It has a role in transcription-coupled repair, a subpathway of nucleotide excision repair (NER). Mfd recognizes stalled RNA polymerase (RNAP) and either restarts transcription or removes the stalled polymerase and recruits the NER proteins UvrA and UvrB.
Function
Mfd has ATP hydrolysis activity, DNA binding sites and a UvrA binding sites. These three functions are inhibited in the isolated enzyme, but are activated when Mfd encounters stalled RNA polymerase (or through various mutations that remove inhibitory domains [1]). Mfd also contains an RNA interaction domain (RID) that binds to the beta subunit of RNAP.
Structural highlights
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Proteopedia Page Contributors and Editors (what is this?)
Karsten Theis, Michal Harel, Alexander Berchansky, Wayne Decatur
