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Green Fluorescent Protein 3D structures
From Proteopedia
(Difference between revisions)
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* Green Fluorescent Protein | * Green Fluorescent Protein | ||
| - | **[[2qu1]], [[2h9w]], [[5t3i]], [[5dy6]], [[5dtz]], [[5dtx]], [[5btt]], [[5bt0]], [[4xow]], [[4pfe]], [[6as9]], [[5wwk]], [[5o89]], [[5jzl]], [[5jzk]], [[6qq8]], [[6qq9]], [[6qqa]], [[6qqb]], [[6pfr]], [[6pfs]], [[6pft]], [[6pfu]], [[6t39]], [[6t3a]], [[7a7k]], [[7a7l]], [[7a7s]], [[7a7t]] – jGFP - jellyfish<br /> | + | **[[2qu1]], [[2h9w]], [[4tzg]], [[5t3i]], [[5dy6]], [[5dtz]], [[5dtx]], [[5btt]], [[5bt0]], [[4xow]], [[4pfe]], [[5nhn]], [[6oa8]], [[6as9]], [[5wwk]], [[5o89]], [[5jzl]], [[5jzk]], [[6qq8]], [[6qq9]], [[6qqa]], [[6qqb]], [[6pfr]], [[6pfs]], [[6pft]], [[6pfu]], [[6t39]], [[6t3a]], [[7a7k]], [[7a7l]], [[7a7s]], [[7a7t]], [[7a7u]], [[7a7x]], [[7km4]], [[7pca]], [[7pcz]], [[7pd0]] – jGFP - jellyfish<br /> |
| - | **[[3la1]], [[3i19]], [[2wur]], [[3gex]], [[2qrf]], [[2qt2]], [[2qz0]], [[2gj2]], [[3cb9]], [[3cbe]], [[3cd1]], [[3cd9]], [[2hjo]], [[2hqz]], [[2hrs]], [[2okw]], [[2oky]], [[2q57]], [[2due]], [[2duf]], [[2dug]], [[2duh]], [[2dui]], [[2hcg]], [[2hfc]], [[2hgd]], [[2hgy]], [[2awj]], [[2awk]], [[2awl]], [[2awm]], [[2g16]], [[2g2s]], [[2g3d]], [[2g5z]], [[2g6e]], [[2ah8]], [[2aha]], [[2fwq]], [[2fzu]], [[1z1p]], [[1z1q]], [[1yhg]], [[1yhh]], [[1yhi]], [[1yj2]], [[1yjf]], [[1s6z]], [[1q4a]], [[1q4b]], [[1q4c]], [[1q4d]], [[1q4e]], [[1q73]], [[1qyf]], [[1qyo]], [[1qyq]], [[1qst]], [[1qy3]], [[1cv7]], [[1jc0]], [[1jc1]], [[1jby]], [[1jbz]], [[1kp5]], [[1kyp]], [[1hcj]], [[1h6r]], [[1b9c]], [[1c4f]], [[1emc]], [[1eme]], [[1emf]], [[1emk]], [[1eml]], [[1emm]], [[2emd]], [[2emn]], [[2emo]], [[1emb]], [[1gfl]], [[1ema]], [[2y0g]], [[3gj1]], [[3gj2]], [[3p28]], [[1qxt]], [[3sry]], [[3ssp]], [[3st0]], [[3ufz]], [[3ug0]], [[4eul]], [[4ges]], [[4j88]], [[4j89]], [[4j8a]], [[3w1c]], [[3w1d]], [[4h47]], [[4h48]], [[4jfg]], [[4lw5]], [[4ka9]], [[4kag]], [[4kex]], [[4n3d]], [[4ogs]], [[4p1q]], [[5hzo]], [[5hw9]], [[5hge]], [[5hbd]], [[5ehu]], [[5dpj]], [[5dpi]], [[5dpg]], [[5dph]], [[6b7t]], [[6b7r]], [[5wj4]], [[5wj3]], [[5wj2]], [[5o8c]], [[5o8b]], [[5o8a]], [[5n9o]], [[5mse]], [[6fll]], [[6jgj]], [[6jgi]], [[6jgh]], [[6ir7]], [[6ir6]], [[6grm]], [[6gqh]], [[6gqg]], [[6go9]], [[6go8]], [[6fww]], [[6dq1]], [[6aa6]], [[6aa2]], [[5yr2]], [[5ni3]], [[6hut]], [[6kkz]], [[6kl0]], [[6kl1]], [[6krg]], [[6l27]], [[6quh]], [[6qui]], [[6quj]], [[6uhj]], [[6uhk]], [[6uhl]], [[6uhm]], [[6uhn]], [[6uho]], [[6uhp]], [[6uhq]], [[6uhr]], [[6un4]], [[6un5]], [[6vio]], [[7a7q]], [[7a7r]], [[7a7v]], [[7a7w]], [[7a7y]], [[7a84]], [[7a85]], [[7a8j]], [[7a8n]], [[7a8o]] – jGFP (mutant)<br /> | + | **[[3la1]], [[3i19]], [[2wur]], [[3gex]], [[2qrf]], [[2qt2]], [[2qz0]], [[2gj2]], [[3cb9]], [[3cbe]], [[3cd1]], [[3cd9]], [[2hjo]], [[2hqz]], [[2hrs]], [[2okw]], [[2oky]], [[2q57]], [[2due]], [[2duf]], [[2dug]], [[2duh]], [[2dui]], [[2hcg]], [[2hfc]], [[2hgd]], [[2hgy]], [[2awj]], [[2awk]], [[2awl]], [[2awm]], [[2g16]], [[2g2s]], [[2g3d]], [[2g5z]], [[2g6e]], [[2ah8]], [[2aha]], [[2fwq]], [[2fzu]], [[1z1p]], [[1z1q]], [[1yhg]], [[1yhh]], [[1yhi]], [[1yj2]], [[1yjf]], [[1s6z]], [[1q4a]], [[1q4b]], [[1q4c]], [[1q4d]], [[1q4e]], [[1q73]], [[1qyf]], [[1qyo]], [[1qyq]], [[1qst]], [[1qy3]], [[1cv7]], [[1jc0]], [[1jc1]], [[1jby]], [[1jbz]], [[1kp5]], [[1kyp]], [[1hcj]], [[1h6r]], [[1b9c]], [[1c4f]], [[1emc]], [[1eme]], [[1emf]], [[1emk]], [[1eml]], [[1emm]], [[2emd]], [[2emn]], [[2emo]], [[1emb]], [[1gfl]], [[1ema]], [[2y0g]], [[3gj1]], [[3gj2]], [[3p28]], [[1qxt]], [[3sry]], [[3ssp]], [[3st0]], [[3ufz]], [[3ug0]], [[4eul]], [[4ges]], [[4j88]], [[4j89]], [[4j8a]], [[3w1c]], [[3w1d]], [[4h47]], [[4h48]], [[4jfg]], [[4lw5]], [[4ka9]], [[4kag]], [[4kex]], [[4l12]], [[4l13]], [[4l1i]], [[4n3d]], [[4ogs]], [[4p1q]], [[5hzo]], [[5hw9]], [[5hge]], [[5hbd]], [[5ehu]], [[5dpj]], [[5dpi]], [[5dpg]], [[5dph]], [[6b7t]], [[6b7r]], [[5wj4]], [[5wj3]], [[5wj2]], [[5o8c]], [[5o8b]], [[5o8a]], [[5n9o]], [[5mse]], [[6fll]], [[6jgj]], [[6jgi]], [[6jgh]], [[6ir7]], [[6ir6]], [[6grm]], [[6gqh]], [[6gqg]], [[6go9]], [[6go8]], [[6fww]], [[6dq1]], [[6aa6]], [[6aa2]], [[5yr2]], [[5ni3]], [[6hut]], [[6kkz]], [[6kl0]], [[6kl1]], [[6krg]], [[6l27]], [[6quh]], [[6qui]], [[6quj]], [[6uhj]], [[6uhk]], [[6uhl]], [[6uhm]], [[6uhn]], [[6uho]], [[6uhp]], [[6uhq]], [[6uhr]], [[6un4]], [[6un5]], [[6vio]], [[6zsm]], [[6zsn]], [[7a7m]], [[7a7o]], [[7a7p]], [[7a7q]], [[7a7r]], [[7a7v]], [[7a7w]], [[7a7y]], [[7a7z]], [[7a80]], [[7a81]], [[7a82]], [[7a83]], [[7a84]], [[7a85]], [[7a86]], [[7a87]], [[7a88]], [[7a89]], [[7a8a]], [[7a8b]], [[7a8c]], [[7a8d]], [[7a8e]], [[7a8f]], [[7a8g]], [[7a8i]], [[7a8j]], [[7a8k]], [[7a8l]], [[7a8n]], [[7a8o]], [[7amb]], [[7amf]], [[7amu]], [[7o7c]], [[7o7d]], [[7o7e]], [[7o7h]], [[7o7u]], [[7o7v]], [[7o7w]], [[7o7x]], [[8dpd]] – jGFP (mutant)<br /> |
**[[6mdr]] – jGFP (mutant) – Cryo EM<br /> | **[[6mdr]] – jGFP (mutant) – Cryo EM<br /> | ||
**[[3evp]], [[5f9g]], [[4zf5]], [[4zf4]], [[4zf3]], [[6ofk]], [[6ofl]], [[6ofm]], [[6ofn]], [[6ofo]], [[6og8]], [[6og9]], [[6oga]], [[6ogb]], [[6ogc]], [[6un6]], [[6un7]] – jGFP circular permutation<br /> | **[[3evp]], [[5f9g]], [[4zf5]], [[4zf4]], [[4zf3]], [[6ofk]], [[6ofl]], [[6ofm]], [[6ofn]], [[6ofo]], [[6og8]], [[6og9]], [[6oga]], [[6ogb]], [[6ogc]], [[6un6]], [[6un7]] – jGFP circular permutation<br /> | ||
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** [[3ss0]], [[3ssh]], [[3ssk]], [[3ssl]], [[3sst]], [[3ssv]], [[3ssy]], [[3sv5]], [[3svb]], [[3svc]], [[3svd]], [[3sve]] – jGFP (mutant)+imidazole derivative+ halide<br /> | ** [[3ss0]], [[3ssh]], [[3ssk]], [[3ssl]], [[3sst]], [[3ssv]], [[3ssy]], [[3sv5]], [[3svb]], [[3svc]], [[3svd]], [[3sve]] – jGFP (mutant)+imidazole derivative+ halide<br /> | ||
** [[4gf6]] - jGFP (mutant) +Cu<br /> | ** [[4gf6]] - jGFP (mutant) +Cu<br /> | ||
| - | ** [[3ogo]], [[3g9a]], [[3k1k]], [[6lr7]], [[6xzf]] – jGFP + nanobody <br /> | + | ** [[3ogo]], [[3g9a]], [[3k1k]], [[6lr7]], [[6lz2]], [[6xzf]], [[7cz0]], [[7e53]], [[7sah]], [[7sai]] – jGFP + nanobody <br /> |
**[[4xvp]], [[4xl5]] – jGFP (mutant) + BGFP<br /> | **[[4xvp]], [[4xl5]] – jGFP (mutant) + BGFP<br /> | ||
**[[5mfc]] – jGFP + armadillo repeat protein<br /> | **[[5mfc]] – jGFP + armadillo repeat protein<br /> | ||
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**[[5ma8]], [[5ma6]] – jGFP + 3G124NC<br /> | **[[5ma8]], [[5ma6]] – jGFP + 3G124NC<br /> | ||
**[[5lem]], [[5lel]] – jGFP + MBP + 3G124<br /> | **[[5lem]], [[5lel]] – jGFP + MBP + 3G124<br /> | ||
| + | **[[5wts]] – jGFP + MDM2<br /> | ||
** [[2qle]] – GFP (mutant) – ''Azotobacter vinelandii''<br /> | ** [[2qle]] – GFP (mutant) – ''Azotobacter vinelandii''<br /> | ||
** [[2rh7]] – GFP – ''Renilla reniformis''<br /> | ** [[2rh7]] – GFP – ''Renilla reniformis''<br /> | ||
** [[3adf]] – monomeric azami green – ''Galaxea fascicularis''<br /> | ** [[3adf]] – monomeric azami green – ''Galaxea fascicularis''<br /> | ||
| - | ** [[2vzx]], [[5exb]] – DeGFP – Dendronephthya<br /> | + | ** [[2vzx]], [[5exb]], [[7dig]] – DeGFP – Dendronephthya<br /> |
** [[2gw3]] – GFP KAEDE – ''Trachiphyllia geoffroyi''<br /> | ** [[2gw3]] – GFP KAEDE – ''Trachiphyllia geoffroyi''<br /> | ||
** [[2pox]], [[2gx0]], [[2gx2]], [[2iov]], [[2ie2]] – EchFP Dronpa2 – Echinophyllia<br /> | ** [[2pox]], [[2gx0]], [[2gx2]], [[2iov]], [[2ie2]] – EchFP Dronpa2 – Echinophyllia<br /> | ||
| - | **[[6d38]], [[6d39]], [[6nqj]], [[6nqk]], [[6nql]], [[6nqq]], [[6nqr]], [[6nqs]], [[6nqv]] - EchFP Dronpa2 (mutant) <br /> | + | ** [[6d38]], [[6d39]], [[6nqj]], [[6nqk]], [[6nql]], [[6nqq]], [[6nqr]], [[6nqs]], [[6nqv]] - EchFP Dronpa2 (mutant) <br /> |
** [[2dd7]] – CpGFP - ''Chiridius poppei''<br /> | ** [[2dd7]] – CpGFP - ''Chiridius poppei''<br /> | ||
** [[2dd9]] – CpGFP (mutant)<br /> | ** [[2dd9]] – CpGFP (mutant)<br /> | ||
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** [[4dkm]], [[4dkn]] – GFP – Florida lancelet<br /> | ** [[4dkm]], [[4dkn]] – GFP – Florida lancelet<br /> | ||
** [[4hvf]] – clGFP N terminal (mutant) – common lancelet<br /> | ** [[4hvf]] – clGFP N terminal (mutant) – common lancelet<br /> | ||
| - | ** [[4dxi]], [[4dxm]], [[5aqb]] – GFP – synthetic<br /> | + | ** [[4dxi]], [[4dxm]], [[4tza]], [[5aqb]] – GFP – synthetic<br /> |
| - | **[[5y01]], [[5y00]], [[6j1a]], [[6jxf]] – OfGFP – ''Olindia formosa''<br /> | + | ** [[5y01]], [[5y00]], [[6j1a]], [[6jxf]] – OfGFP – ''Olindia formosa''<br /> |
| - | **[[6j1b]], [[6j1c]] – OfRFP (mutant) <br /> | + | ** [[6j1b]], [[6j1c]] – OfRFP (mutant) <br /> |
| - | **[[4jc2]] – GFP – soft coral<br /> | + | ** [[4jc2]] – GFP – soft coral<br /> |
| - | **[[6l26]] – GFP – ''Nicotiana benthamiana''<br /> | + | ** [[6l26]] – GFP – ''Nicotiana benthamiana''<br /> |
| - | **[[7lg4]] – GFP – ''Aequorea macrodactyla''<br /> | + | ** [[7lg4]] – GFP – ''Aequorea macrodactyla''<br /> |
**[[6s67]] – GFP – ''Aequorea australis''<br /> | **[[6s67]] – GFP – ''Aequorea australis''<br /> | ||
**[[6m9x]], [[6m9y]], [[6m9z]] – GFP – ''Branchiostoma floridae''<br /> | **[[6m9x]], [[6m9y]], [[6m9z]] – GFP – ''Branchiostoma floridae''<br /> | ||
| + | **[[4i3b]] – JeGFP – Japanese eel<br /> | ||
| + | **[[4i3d]] – JeGFP (mutant)<br /> | ||
* Yellow fluorescent protein | * Yellow fluorescent protein | ||
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*Yellow-green fluorescent protein | *Yellow-green fluorescent protein | ||
| - | **[[5ltr]] – clRFP<br /> | + | **[[5ltp]], [[5ltr]] – clRFP<br /> |
* Red fluorescent protein or mCherry | * Red fluorescent protein or mCherry | ||
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** [[2zo6]], [[2zo7]] – cyan FP – ''Fungia concinna''<br /> | ** [[2zo6]], [[2zo7]] – cyan FP – ''Fungia concinna''<br /> | ||
** [[1oxd]], [[1oxe]], [[1oxf]] – cyan FP (mutant) – marker plasmid<br /> | ** [[1oxd]], [[1oxe]], [[1oxf]] – cyan FP (mutant) – marker plasmid<br /> | ||
| + | **[[7z7o]], [[7z7p]] – GFP – amphioxus<br /> | ||
| + | **[[7z7q]] – GFP – ''Branchiostoma lancelatum''<br /> | ||
* Blue fluorescent protein | * Blue fluorescent protein | ||
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** [[3ai4]] – jGFP/mPolymerase iota ubiquitin binding motif - mouse<br /> | ** [[3ai4]] – jGFP/mPolymerase iota ubiquitin binding motif - mouse<br /> | ||
** [[3ai5]], [[3vht]] - jGFP/m ubiquitin<br /> | ** [[3ai5]], [[3vht]] - jGFP/m ubiquitin<br /> | ||
| + | **[[4i2y]], [[6hr1]] - jGFP/myosin light chain<br /> | ||
** [[3o77]], [[3o78]], [[3ek4]], [[3ek7]] - jGFP/myosin light chain kinase/calmodulin<br /> | ** [[3o77]], [[3o78]], [[3ek4]], [[3ek7]] - jGFP/myosin light chain kinase/calmodulin<br /> | ||
** [[4anj]] - jGFP/myosin light chain kinase + calmodulin<br /> | ** [[4anj]] - jGFP/myosin light chain kinase + calmodulin<br /> | ||
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**[[6mb2]] – jGFP/AIM2 – Cryo EM<br /> | **[[6mb2]] – jGFP/AIM2 – Cryo EM<br /> | ||
**[[6itc]] – jGFP/translocase + nanobody – Cryo EM<br /> | **[[6itc]] – jGFP/translocase + nanobody – Cryo EM<br /> | ||
| - | **[[6uz3]] – jGFP/sodium channel – Cryo EM<br /> | + | **[[6uz3]], [[7xmf]], [[7xmg]] – jGFP/sodium channel – Cryo EM<br /> |
**[[7k18]] – jGFP/sodium channel + toxin – Cryo EM<br /> | **[[7k18]] – jGFP/sodium channel + toxin – Cryo EM<br /> | ||
| - | **[[6uz0]] – jGFP/sodium channel + drug – Cryo EM<br /> | + | **[[6uz0]], [[8f6p]] – jGFP/sodium channel + drug – Cryo EM<br /> |
| + | **[[7ssx]], [[7ssy]] – jGFP/potassium channel – Cryo EM<br /> | ||
| + | **[[7ssv]] – jGFP/potassium channel + antibody – Cryo EM<br /> | ||
| + | **[[7ssz]], [[8dfl]] – jGFP/potassium channel + nanobody – Cryo EM<br /> | ||
| + | **[[7sjd]], [[7zji]] – jGFP/receptor potential cation channel – Cryo EM<br /> | ||
**[[6val]], [[6vam]] – jGFP/Calhm – Cryo EM<br /> | **[[6val]], [[6vam]] – jGFP/Calhm – Cryo EM<br /> | ||
**[[7byl]] – jGFP/KCNQ4 – Cryo EM<br /> | **[[7byl]] – jGFP/KCNQ4 – Cryo EM<br /> | ||
**[[7bym]], [[7byn]] – jGFP/KCNQ4 + drug – Cryo EM<br /> | **[[7bym]], [[7byn]] – jGFP/KCNQ4 + drug – Cryo EM<br /> | ||
| + | **[[5bkf]], [[7l31]] – jGFP/glycine receptor – Cryo EM<br /> | ||
| + | **[[7eeb]] – jGFP/catspermasome – Cryo EM<br /> | ||
| + | **[[6yov]] – jGFP/nucleosome – Cryo EM<br /> | ||
| + | **[[7sx3]], [[7sx4]] – jGFP/channelosome – Cryo EM<br /> | ||
| + | **[[7rfp]] – jGFP/TNFR + antibody – Cryo EM<br /> | ||
| + | **[[4z4k]] – jGFP/TAX1-binding protein – Cryo EM<br /> | ||
| + | **[[4z4m]] – jGFP/TAX1-binding protein <br /> | ||
| + | **[[7vcm]] – jGFP/potassium-binding protein <br /> | ||
| + | **[[8et3]] – jGFP in delivery complex – Cryo EM<br /> | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 09:29, 20 April 2023
3D structures of Green Fluorescent Protein
(Updated on 20-April-2023)
