This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1kv5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:05, 16 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1kv5' size='340' side='right'caption='[[1kv5]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='1kv5' size='340' side='right'caption='[[1kv5]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1kv5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trybb Trybb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KV5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KV5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1kv5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei_brucei Trypanosoma brucei brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KV5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KV5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE'>DTT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PGA:2-PHOSPHOGLYCOLIC+ACID'>PGA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Triose-phosphate_isomerase Triose-phosphate isomerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.1 5.3.1.1] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE'>DTT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PGA:2-PHOSPHOGLYCOLIC+ACID'>PGA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kv5 OCA], [https://pdbe.org/1kv5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kv5 RCSB], [https://www.ebi.ac.uk/pdbsum/1kv5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kv5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kv5 OCA], [https://pdbe.org/1kv5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kv5 RCSB], [https://www.ebi.ac.uk/pdbsum/1kv5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kv5 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TPIS_TRYBB TPIS_TRYBB]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 35: Line 37:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Triose-phosphate isomerase]]
+
[[Category: Trypanosoma brucei brucei]]
-
[[Category: Trybb]]
+
[[Category: Kursula I]]
-
[[Category: Kursula, I]]
+
[[Category: Lambeir A-M]]
-
[[Category: Lambeir, A M]]
+
[[Category: Partanen S]]
-
[[Category: Partanen, S]]
+
[[Category: Wierenga RK]]
-
[[Category: Wierenga, R K]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Mutant]]
+
-
[[Category: Salt bridge]]
+
-
[[Category: Tim barrel]]
+

Current revision

Structure of Trypanosoma brucei brucei TIM with the salt-bridge-forming residue Arg191 mutated to Ser

PDB ID 1kv5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools