1mnt
From Proteopedia
(Difference between revisions)
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==SOLUTION STRUCTURE OF DIMERIC MNT REPRESSOR (1-76)== | ==SOLUTION STRUCTURE OF DIMERIC MNT REPRESSOR (1-76)== | ||
- | <StructureSection load='1mnt' size='340' side='right'caption='[[1mnt | + | <StructureSection load='1mnt' size='340' side='right'caption='[[1mnt]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1mnt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1mnt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_virus_P22 Salmonella virus P22]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MNT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MNT FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mnt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mnt OCA], [https://pdbe.org/1mnt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mnt RCSB], [https://www.ebi.ac.uk/pdbsum/1mnt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mnt ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mnt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mnt OCA], [https://pdbe.org/1mnt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mnt RCSB], [https://www.ebi.ac.uk/pdbsum/1mnt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mnt ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/RMNT_BPP22 RMNT_BPP22] Mnt acts as a transcriptional repressor of genes ant and arc. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mnt ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mnt ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Wild-type Mnt repressor of Salmonella bacteriophage P22 is a tetrameric protein of 82 residues per monomer. A C-terminal deletion mutant of the repressor denoted Mnt (1-76) is a dimer in solution. The structure of this dimer has been determined using NMR. The NMR assignments of the majority of the 1H, 15N, and 13C resonances were obtained using 2D and triple-resonance 3D techniques. Elements of secondary structure were identified on the basis of characteristic sequential and medium range NOEs. For the structure determination more than 1000 NOEs per monomer were obtained, and structures were generated using distance geometry and restrained simulated annealing calculations. The discrimination of intra- vs intermonomer NOEs was based upon the observation of intersubunit NOEs in [15N,13C] double half-filtered NOESY experiments. The N-terminal part of Mnt (residues 1-44), which shows a 40% sequence homology with the Arc repressor, has a similar secondary and tertiary structure. Mnt (1-76) continues with a loop region of irregular structure, a third alpha-helix, and a random coil C-terminal peptide. Analysis of the secondary structure NOEs, the exchange rates, and the backbone chemical shifts suggests that the carboxy-terminal third helix is less stable than the remainder of the protein, but the observation of intersubunit NOEs for this part of the protein enables the positioning of this helix. The rsmd's between the backbone atoms of the N-terminal part of the Mnt repressor (residues 5-43, 5'-43') and the Arc repressor is 1.58 A, and between this region and the corresponding part of the MetJ repressor 1.43 A. | ||
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- | Solution structure of dimeric Mnt repressor (1-76).,Burgering MJ, Boelens R, Gilbert DE, Breg JN, Knight KL, Sauer RT, Kaptein R Biochemistry. 1994 Dec 20;33(50):15036-45. PMID:7999761<ref>PMID:7999761</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1mnt" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Bpp22]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Boelens | + | [[Category: Salmonella virus P22]] |
- | [[Category: Breg | + | [[Category: Boelens R]] |
- | [[Category: Burgering | + | [[Category: Breg JN]] |
- | [[Category: Gilbert | + | [[Category: Burgering MJM]] |
- | [[Category: Kaptein | + | [[Category: Gilbert DE]] |
- | [[Category: Knight | + | [[Category: Kaptein R]] |
- | [[Category: Sauer | + | [[Category: Knight KL]] |
- | + | [[Category: Sauer RT]] |
Revision as of 08:38, 10 April 2024
SOLUTION STRUCTURE OF DIMERIC MNT REPRESSOR (1-76)
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