7p2l
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==thermostabilised 7TM domain of human mGlu5 receptor bound to photoswitchable ligand alloswitch-1== | ==thermostabilised 7TM domain of human mGlu5 receptor bound to photoswitchable ligand alloswitch-1== | ||
- | <StructureSection load='7p2l' size='340' side='right'caption='[[7p2l]]' scene=''> | + | <StructureSection load='7p2l' size='340' side='right'caption='[[7p2l]], [[Resolution|resolution]] 2.54Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P2L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P2L FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7p2l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P2L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P2L FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p2l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p2l OCA], [https://pdbe.org/7p2l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p2l RCSB], [https://www.ebi.ac.uk/pdbsum/7p2l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p2l ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4YI:2-chloranyl-~{N}-[2-methoxy-4-[(~{E})-pyridin-2-yldiazenyl]phenyl]benzamide'>4YI</scene></td></tr> |
+ | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'>YCM</scene></td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GRM5, GPRC1E, MGLUR5 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p2l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p2l OCA], [https://pdbe.org/7p2l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p2l RCSB], [https://www.ebi.ac.uk/pdbsum/7p2l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p2l ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [[https://www.uniprot.org/uniprot/GRM5_HUMAN GRM5_HUMAN]] Receptor for glutamate. The activity of this receptor is mediated by a G-protein that activates a phosphatidylinositol-calcium second messenger system and generates a calcium-activated chloride current. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Metabotropic glutamate receptors (mGluRs) are dimeric G-protein-coupled receptors activated by the main excitatory neurotransmitter, L-glutamate. mGluR activation by agonists binding in the venus flytrap domain is regulated by positive (PAM) or negative (NAM) allosteric modulators binding to the 7-transmembrane domain (7TM). We report the cryo-electron microscopy structures of fully inactive and intermediate-active conformations of mGlu5 receptor bound to an antagonist and a NAM or an agonist and a PAM, respectively, as well as the crystal structure of the 7TM bound to a photoswitchable NAM. The agonist induces a large movement between the subunits, bringing the 7TMs together and stabilizing a 7TM conformation structurally similar to the inactive state. Using functional approaches, we demonstrate that the PAM stabilizes a 7TM active conformation independent of the conformational changes induced by agonists, representing an alternative mode of mGlu activation. These findings provide a structural basis for different mGluR activation modes. | ||
+ | |||
+ | Agonists and allosteric modulators promote signaling from different metabotropic glutamate receptor 5 conformations.,Nasrallah C, Cannone G, Briot J, Rottier K, Berizzi AE, Huang CY, Quast RB, Hoh F, Baneres JL, Malhaire F, Berto L, Dumazer A, Font-Ingles J, Gomez-Santacana X, Catena J, Kniazeff J, Goudet C, Llebaria A, Pin JP, Vinothkumar KR, Lebon G Cell Rep. 2021 Aug 31;36(9):109648. doi: 10.1016/j.celrep.2021.109648. PMID:34469715<ref>PMID:34469715</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7p2l" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Human]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Huang | + | [[Category: Lysozyme]] |
- | [[Category: Lebon G]] | + | [[Category: Huang, C Y]] |
- | [[Category: Vinothkumar | + | [[Category: Lebon, G]] |
+ | [[Category: Vinothkumar, K R]] | ||
+ | [[Category: Allosteric modulator]] | ||
+ | [[Category: G protein coupled receptor]] | ||
+ | [[Category: Mglu5 7tm]] | ||
+ | [[Category: Photoswitchable ligand]] | ||
+ | [[Category: Signaling protein]] |
Revision as of 12:58, 13 October 2021
thermostabilised 7TM domain of human mGlu5 receptor bound to photoswitchable ligand alloswitch-1
|