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1pu7

From Proteopedia

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Current revision (09:47, 16 August 2023) (edit) (undo)
 
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<StructureSection load='1pu7' size='340' side='right'caption='[[1pu7]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
<StructureSection load='1pu7' size='340' side='right'caption='[[1pu7]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1pu7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43504 Atcc 43504]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PU7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PU7 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1pu7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PU7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PU7 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=39A:6-AMINO-3,9-DIMETHYL-9H-PURIN-3-IUM'>39A</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=39A:6-AMINO-3,9-DIMETHYL-9H-PURIN-3-IUM'>39A</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1pu6|1pu6]], [[1pu8|1pu8]]</div></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pu7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pu7 OCA], [https://pdbe.org/1pu7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pu7 RCSB], [https://www.ebi.ac.uk/pdbsum/1pu7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pu7 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pu7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pu7 OCA], [https://pdbe.org/1pu7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pu7 RCSB], [https://www.ebi.ac.uk/pdbsum/1pu7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pu7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/O25323_HELPY O25323_HELPY]] DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity (By similarity).[PIRNR:PIRNR001435]
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[https://www.uniprot.org/uniprot/O25323_HELPY O25323_HELPY] DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity (By similarity).[PIRNR:PIRNR001435]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 43504]]
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[[Category: Helicobacter pylori]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Eichman, B F]]
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[[Category: Eichman BF]]
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[[Category: Ellenberger, T]]
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[[Category: Ellenberger T]]
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[[Category: Radicella, J P]]
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[[Category: O'Rourke EJ]]
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[[Category: Rourke, E J.O]]
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[[Category: Radicella JP]]
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[[Category: 3-methyladenine]]
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[[Category: Base excision repair]]
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[[Category: Glycosylase]]
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[[Category: Helix-hairpin-helix]]
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[[Category: Hydrolase]]
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Current revision

Crystal structure of H.pylori 3-methyladenine DNA glycosylase (MagIII) bound to 3,9-dimethyladenine

PDB ID 1pu7

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OCA

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