7l7x

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Current revision (15:40, 18 October 2023) (edit) (undo)
 
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<StructureSection load='7l7x' size='340' side='right'caption='[[7l7x]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='7l7x' size='340' side='right'caption='[[7l7x]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[7l7x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Psyck Psyck]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7L7X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7L7X FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7l7x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Psychrobacter_cryohalolentis_K5 Psychrobacter cryohalolentis K5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7L7X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7L7X FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4RA:[(2R,3R,4R,5S,6R)-3-ACETAMIDO-6-METHYL-5-[(E)-[2-METHYL-3-OXIDANYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]-4-OXIDANYL-OXAN-2-YL]+[[(2R,3S,4R,5R)-5-[2,4-BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]+HYDROGEN+PHOSPHATE'>4RA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene>, <scene name='pdbligand=TMA:TETRAMETHYLAMMONIUM+ION'>TMA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Pcryo_0638 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=335284 PSYCK])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4RA:[(2R,3R,4R,5S,6R)-3-ACETAMIDO-6-METHYL-5-[(E)-[2-METHYL-3-OXIDANYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]-4-OXIDANYL-OXAN-2-YL]+[[(2R,3S,4R,5R)-5-[2,4-BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]+HYDROGEN+PHOSPHATE'>4RA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene>, <scene name='pdbligand=TMA:TETRAMETHYLAMMONIUM+ION'>TMA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7l7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7l7x OCA], [https://pdbe.org/7l7x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7l7x RCSB], [https://www.ebi.ac.uk/pdbsum/7l7x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7l7x ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7l7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7l7x OCA], [https://pdbe.org/7l7x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7l7x RCSB], [https://www.ebi.ac.uk/pdbsum/7l7x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7l7x ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q1QD32_PSYCK Q1QD32_PSYCK]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Psyck]]
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[[Category: Psychrobacter cryohalolentis K5]]
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[[Category: Holden, H M]]
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[[Category: Holden HM]]
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[[Category: Linehan, M P]]
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[[Category: Linehan MP]]
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[[Category: Thoden, J B]]
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[[Category: Thoden JB]]
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[[Category: Aminotransferase]]
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[[Category: Carbohydrate]]
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[[Category: Deoxysugar]]
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[[Category: Pyridoxal 5'-phosphate]]
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[[Category: Transferase]]
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Current revision

X-ray structure of the Pcryo_0638 aminotransferase from Psychrobacter cryohalolentis

PDB ID 7l7x

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