This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1c8r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:49, 9 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1c8r' size='340' side='right'caption='[[1c8r]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='1c8r' size='340' side='right'caption='[[1c8r]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1c8r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_halobius_ruber"_klebahn_1919 "bacillus halobius ruber" klebahn 1919]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C8R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C8R FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1c8r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C8R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C8R FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LI1:1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL'>LI1</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=SQU:2,10,23-TRIMETHYL-TETRACOSANE'>SQU</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1c3w|1c3w]], [[1c8s|1c8s]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LI1:1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL'>LI1</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=SQU:2,10,23-TRIMETHYL-TETRACOSANE'>SQU</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c8r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c8r OCA], [https://pdbe.org/1c8r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c8r RCSB], [https://www.ebi.ac.uk/pdbsum/1c8r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c8r ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c8r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c8r OCA], [https://pdbe.org/1c8r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c8r RCSB], [https://www.ebi.ac.uk/pdbsum/1c8r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c8r ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA]] Light-driven proton pump.
+
[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 36: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus halobius ruber klebahn 1919]]
+
[[Category: Halobacterium salinarum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Luecke, H]]
+
[[Category: Luecke H]]
-
[[Category: D96n br state]]
+
-
[[Category: Haloarchaea]]
+
-
[[Category: Ion pump]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Lipid]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Merohedral twinning]]
+
-
[[Category: Photoreceptor]]
+
-
[[Category: Proton transport]]
+
-
[[Category: Retinal protein]]
+

Current revision

BACTERIORHODOPSIN D96N BR STATE AT 2.0 A RESOLUTION

PDB ID 1c8r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1c8r"
Personal tools