This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5sbu
From Proteopedia
(Difference between revisions)
m (Protected "5sbu" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
==CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z839988838== | ==CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z839988838== | ||
| - | <StructureSection load='5sbu' size='340' side='right'caption='[[5sbu]]' scene=''> | + | <StructureSection load='5sbu' size='340' side='right'caption='[[5sbu]], [[Resolution|resolution]] 1.04Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5SBU FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5sbu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5SBU FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5sbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5sbu OCA], [https://pdbe.org/5sbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5sbu RCSB], [https://www.ebi.ac.uk/pdbsum/5sbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5sbu ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.044Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8C2:N-[(3,5-dimethyl-1H-pyrazol-4-yl)methyl]cyclohexanamine'>8C2</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5sbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5sbu OCA], [https://pdbe.org/5sbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5sbu RCSB], [https://www.ebi.ac.uk/pdbsum/5sbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5sbu ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/CD44_MOUSE CD44_MOUSE] Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing. | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Mus musculus]] | ||
[[Category: Bezerra GA]] | [[Category: Bezerra GA]] | ||
[[Category: Bountra C]] | [[Category: Bountra C]] | ||
Current revision
CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z839988838
| |||||||||||
