We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

6vkx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:14, 11 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6vkx' size='340' side='right'caption='[[6vkx]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
<StructureSection load='6vkx' size='340' side='right'caption='[[6vkx]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6vkx]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_group_a_rotavirus Human group a rotavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VKX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VKX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6vkx]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_rotavirus_A Human rotavirus A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VKX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VKX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP8 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10941 Human group A rotavirus])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vkx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vkx OCA], [https://pdbe.org/6vkx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vkx RCSB], [https://www.ebi.ac.uk/pdbsum/6vkx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vkx ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vkx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vkx OCA], [https://pdbe.org/6vkx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vkx RCSB], [https://www.ebi.ac.uk/pdbsum/6vkx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vkx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A1Z1XCF6_9VIRU A0A1Z1XCF6_9VIRU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human group a rotavirus]]
+
[[Category: Human rotavirus A]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Jiang, X]]
+
[[Category: Jiang X]]
-
[[Category: Kennedy, M A]]
+
[[Category: Kennedy MA]]
-
[[Category: McGinnis, K R]]
+
[[Category: McGinnis KR]]
-
[[Category: Xu, S]]
+
[[Category: Xu S]]
-
[[Category: Host receptor interaction]]
+
-
[[Category: Rotavirus]]
+
-
[[Category: Viral protein]]
+

Current revision

Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851

PDB ID 6vkx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools