This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7jhz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:03, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7jhz' size='340' side='right'caption='[[7jhz]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
<StructureSection load='7jhz' size='340' side='right'caption='[[7jhz]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7jhz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_group_a_rotavirus Human group a rotavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7JHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7JHZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7jhz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_rotavirus_A Human rotavirus A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7JHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7JHZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.68&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP8 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10941 Human group A rotavirus])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7jhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7jhz OCA], [https://pdbe.org/7jhz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7jhz RCSB], [https://www.ebi.ac.uk/pdbsum/7jhz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7jhz ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7jhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7jhz OCA], [https://pdbe.org/7jhz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7jhz RCSB], [https://www.ebi.ac.uk/pdbsum/7jhz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7jhz ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/H6WUJ8_9VIRU H6WUJ8_9VIRU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human group a rotavirus]]
+
[[Category: Human rotavirus A]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Jiang, X]]
+
[[Category: Jiang X]]
-
[[Category: Kennedy, M A]]
+
[[Category: Kennedy MA]]
-
[[Category: McGinnis, K R]]
+
[[Category: McGinnis KR]]
-
[[Category: Stuckert, M R]]
+
[[Category: Stuckert MR]]
-
[[Category: Xu, S]]
+
[[Category: Xu S]]
-
[[Category: Host receptor interaction]]
+
-
[[Category: Rotavirus]]
+
-
[[Category: Viral protein]]
+

Current revision

Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851 in complex with LNDFH I

PDB ID 7jhz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools