This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7pn0
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus at R32 space group== | ==Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus at R32 space group== | ||
| - | <StructureSection load='7pn0' size='340' side='right'caption='[[7pn0]]' scene=''> | + | <StructureSection load='7pn0' size='340' side='right'caption='[[7pn0]], [[Resolution|resolution]] 1.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=7awo 7awo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PN0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PN0 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7pn0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=7awo 7awo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PN0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PN0 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pn0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pn0 OCA], [https://pdbe.org/7pn0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pn0 RCSB], [https://www.ebi.ac.uk/pdbsum/7pn0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pn0 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pn0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pn0 OCA], [https://pdbe.org/7pn0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pn0 RCSB], [https://www.ebi.ac.uk/pdbsum/7pn0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pn0 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q5SHU3_THET8 Q5SHU3_THET8] Involved in the biosynthesis of ribose 1,5-bisphosphate. Catalyzes the transfer of pyrophosphoryl group from ATP to ribose-5-phosphate to yield phosphoribosyl diphosphate (PRPP) and AMP.[HAMAP-Rule:MF_00583] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Thermus thermophilus]] | ||
[[Category: Abramchik YA]] | [[Category: Abramchik YA]] | ||
[[Category: Esipov RS]] | [[Category: Esipov RS]] | ||
Current revision
Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus at R32 space group
| |||||||||||
