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3mmd

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Current revision (07:56, 12 July 2023) (edit) (undo)
 
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<StructureSection load='3mmd' size='340' side='right'caption='[[3mmd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='3mmd' size='340' side='right'caption='[[3mmd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3mmd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MMD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MMD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3mmd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MMD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MMD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1r85|1r85]], [[1r87|1r87]], [[1n82|1n82]], [[2q8x|2q8x]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRD_900116:4beta-beta-xylobiose'>PRD_900116</scene>, <scene name='pdbligand=PRD_900117:4beta-beta-xylotriose'>PRD_900117</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xynA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 ATCC 12980])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mmd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mmd OCA], [https://pdbe.org/3mmd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mmd RCSB], [https://www.ebi.ac.uk/pdbsum/3mmd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mmd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mmd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mmd OCA], [https://pdbe.org/3mmd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mmd RCSB], [https://www.ebi.ac.uk/pdbsum/3mmd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mmd ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/XYN1_GEOSE XYN1_GEOSE]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 12980]]
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[[Category: Geobacillus stearothermophilus]]
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[[Category: Endo-1,4-beta-xylanase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Feinberg, H]]
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[[Category: Feinberg H]]
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[[Category: Shoham, G]]
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[[Category: Shoham G]]
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[[Category: Shoham, Y]]
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[[Category: Shoham Y]]
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[[Category: Solomon, V]]
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[[Category: Solomon V]]
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[[Category: Tabachnikov, O]]
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[[Category: Tabachnikov O]]
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[[Category: Zolotnitsky, G]]
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[[Category: Zolotnitsky G]]
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[[Category: Hydrolase]]
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[[Category: Mutagenesis]]
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[[Category: Xylanase]]
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Current revision

Crystal structure of the W241A mutant of xylanase from Geobacillus stearothermophilus T-6 (XT6) complexed with hydrolyzed xylopentaose

PDB ID 3mmd

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