Aldolase 3D structures
From Proteopedia
(Difference between revisions)
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**[[1xfb]], [[1qo5]], [[2ald]], [[1ald]], [[5ky6]] – hFBPA – human<br /> | **[[1xfb]], [[1qo5]], [[2ald]], [[1ald]], [[5ky6]] – hFBPA – human<br /> | ||
**[[1xdl]], [[1xdm]] – hFBPA (mutant)<br /> | **[[1xdl]], [[1xdm]] – hFBPA (mutant)<br /> | ||
| - | **[[1zah]], [[1fdj]], [[1ewd]], [[1ewe]], [[1ex5]], [[1ado]], [[5vy5]] - rFBPA – rabbit<br /> | + | **[[1zah]], [[1fdj]], [[1ewd]], [[1ewe]], [[1ex5]], [[1ado]], [[5vy5]], [[7ka4]] - rFBPA – rabbit<br /> |
**[[3dfn]], [[3dfp]], [[3dfq]], [[3dft]], [[2bv4]], [[3b8d]], [[3bv4]], [[5f4x]] – rFBPA (mutant)<br /> | **[[3dfn]], [[3dfp]], [[3dfq]], [[3dft]], [[2bv4]], [[3b8d]], [[3bv4]], [[5f4x]] – rFBPA (mutant)<br /> | ||
| - | **[[6v20]] - rFBPA – Cryo EM<br /> | + | **[[6v20]], [[7k9l]], [[7k9x]], [[7ka2]], [[7ka3]], [[7vdc]] - rFBPA – Cryo EM<br /> |
**[[1fba]] – FBPA – ''Drosophila melanogaster''<br /> | **[[1fba]] – FBPA – ''Drosophila melanogaster''<br /> | ||
**[[1ojx]], [[1ok6]] – TptFBPA – ''Thermoproteus tenax''<br /> | **[[1ojx]], [[1ok6]] – TptFBPA – ''Thermoproteus tenax''<br /> | ||
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**[[5u4n]] – FBPA – ''Neisseria gonorrhoeae''<br /> | **[[5u4n]] – FBPA – ''Neisseria gonorrhoeae''<br /> | ||
**[[6lnk]] – FBPA – ''Candida albicans''<br /> | **[[6lnk]] – FBPA – ''Candida albicans''<br /> | ||
| + | **[[7b2n]] – FBPA – ''Chlamydomonas reinhardtii''<br /> | ||
| + | **[[7efs]] – FBPA – ''Artemisia sieversiana''<br /> | ||
*FBPA complex | *FBPA complex | ||
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**[[3n9r]], [[3n9s]], [[3c52]], [[3c56]] - HpFBPA + inhibitor<br /> | **[[3n9r]], [[3n9s]], [[3c52]], [[3c56]] - HpFBPA + inhibitor<br /> | ||
**[[3mmt]] – FBPA + FBP – ''Bartonella henselae''<br /> | **[[3mmt]] – FBPA + FBP – ''Bartonella henselae''<br /> | ||
| - | **[[7nc7]] – | + | **[[7nc7]] – BmFBPA + dihydroxyacetonephosphate – ''Bacillus methanolicus''<br /> |
| + | **[[7ncc]] – BmFBPA + imidazole + succinate derivativc<br /> | ||
| + | **[[7v6g]] - CaFBPA (mutant) + inhibitor<br /> | ||
| + | **[[7v6f]] - CaFBPA (mutant) + G3P<br /> | ||
*Fructose–6-phosphate aldolase | *Fructose–6-phosphate aldolase | ||
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**[[2a4a]] – DERA – ''Plasmodium yoelii''<br /> | **[[2a4a]] – DERA – ''Plasmodium yoelii''<br /> | ||
**[[1vcv]] – DERA – ''Pyrobaculum aerophilum''<br /> | **[[1vcv]] – DERA – ''Pyrobaculum aerophilum''<br /> | ||
| - | **[[1p1x]], [[1ktn]], [[3npu]], [[3npv]], [[3npw]], [[3npx]], [[3nq2]], [[3nq8]], [[3nqv]], [[3nr0]], [[3q2d]], [[6z9j]] – EcDERA<br /> | + | **[[1p1x]], [[1ktn]], [[3npu]], [[3npv]], [[3npw]], [[3npx]], [[3nq2]], [[3nq8]], [[3nqv]], [[3nr0]], [[3q2d]], [[6z9j]], [[7p75]] – EcDERA<br /> |
**[[5emu]], [[5el1]], [[5eky]], [[6z9h]] - EcDERA (mutant)<br /> | **[[5emu]], [[5el1]], [[5eky]], [[6z9h]] - EcDERA (mutant)<br /> | ||
| - | **[[1jcj]], [[1jcl]] – EcDERA (mutant) + reaction intermediate<br /> | + | **[[1jcj]], [[1jcl]], [[7p76]] – EcDERA (mutant) + reaction intermediate<br /> |
**[[6z9i]] - EcDERA (mutant) + G3P<br /> | **[[6z9i]] - EcDERA (mutant) + G3P<br /> | ||
**[[1n7k]] – ApDERA – ''Aeropyrum pernix''<br /> | **[[1n7k]] – ApDERA – ''Aeropyrum pernix''<br /> | ||
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**[[4b5t]] – EcPyrA + keto-butyrate + Co + Mg<br /> | **[[4b5t]] – EcPyrA + keto-butyrate + Co + Mg<br /> | ||
**[[4b5u]] – EcPyrA + succinic semialdehyde + Co + Mg<br /> | **[[4b5u]] – EcPyrA + succinic semialdehyde + Co + Mg<br /> | ||
| - | **[[4b5v]] – EcPyrA + pyruvate + heptanedioate derivative + Mg | + | **[[4b5v]] – EcPyrA + pyruvate + heptanedioate derivative + Mg<br /> |
| + | **[[tet8]] – AbHpai + Ca <br /> | ||
| + | **[[7etd]] – AbHpai + Ca + Zn<br /> | ||
| + | **[[7ete]] – AbHpai + Ca + Mg<br /> | ||
| + | **[[7etb]], [[7etf]] – AbHpai + pyruvate + Ca + Mn<br /> | ||
| + | **[[7et9]], [[7eta]], [[7etc]], [[7etg]], [[7eth]], [[7eti]] – AbHpai + pyruvate + Ca + Zn<br /> | ||
*Sialic acid aldolase | *Sialic acid aldolase | ||
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**[[1fwr]] - EcKDPG (mutant)<br /> | **[[1fwr]] - EcKDPG (mutant)<br /> | ||
**[[5xse]] - ZmKDPG – ''Zymomonas mobilis''<br /> | **[[5xse]] - ZmKDPG – ''Zymomonas mobilis''<br /> | ||
| + | **[[8di1]] - KDPG – ''Tannerella forsythia''<br /> | ||
*KDPG complex | *KDPG complex | ||
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**[[6bdd]] – KaALD + heme – ''Kordia algicida''<br /> | **[[6bdd]] – KaALD + heme – ''Kordia algicida''<br /> | ||
**[[6bde]] – KaALD (mutant) + heme <br /> | **[[6bde]] – KaALD (mutant) + heme <br /> | ||
| + | |||
| + | *Sulfofructosephosphate aldolase | ||
| + | |||
| + | **[[7ne2]] – SeSFP +SFP/DHAP – ''Salmonella enterica''<br /> | ||
*Phospho-2-dehydro-3-deoxyheptonate aldolase | *Phospho-2-dehydro-3-deoxyheptonate aldolase | ||
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**[[3ocr]] – ALDII – ''Pseudomonas syringae''<br /> | **[[3ocr]] – ALDII – ''Pseudomonas syringae''<br /> | ||
| + | **[[7v8t]] – ALDII – ''Pseudomonas aeruginosa''<br /> | ||
**[[2vws]] – EcALDII<br /> | **[[2vws]] – EcALDII<br /> | ||
**[[2vwt]] – EcALDII + pyruvate <br /> | **[[2vwt]] – EcALDII + pyruvate <br /> | ||
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**[[6btd]] – BtFPA – ''Bacillus thuringiensis''<br /> | **[[6btd]] – BtFPA – ''Bacillus thuringiensis''<br /> | ||
**[[6btg]] – BtFPA + DHAP <br /> | **[[6btg]] – BtFPA + DHAP <br /> | ||
| + | **[7x78f]] – FPA – ''Klebsiella pneumoniae''<br /> | ||
*Sphingosine-1-phosphate Aldolase or Sphingosine-1-phosphate lyase | *Sphingosine-1-phosphate Aldolase or Sphingosine-1-phosphate lyase | ||
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*Retro-aldolase | *Retro-aldolase | ||
| - | **[[3b5l]], [[3hoj]], [[3nxf]], [[3o6y]], [[3ud6]], [[4a29]], [[4pek]], [[4pej]], [[4pa8]] – RA – artificial gene<br /> | + | **[[3b5l]], [[3hoj]], [[3nxf]], [[3o6y]], [[3ud6]], [[4a29]], [[4pek]], [[4pej]], [[4pa8]], [[7f1i]], [[7f1j]], [[7f1k]], [[7f1l]] – RA – artificial gene<br /> |
**[[4ou1]], [[4a2r]], [[4a2s]], [[4pa8]], [[5aou]], [[6tfa]] – SsRA<br /> | **[[4ou1]], [[4a2r]], [[4a2s]], [[4pa8]], [[5aou]], [[6tfa]] – SsRA<br /> | ||
**[[5an7]] – SsRA + inhibitor<br /> | **[[5an7]] – SsRA + inhibitor<br /> | ||
Revision as of 07:40, 1 September 2022
3D structures of Aldolase
Updated on 01-September-2022
