3hao

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:13, 30 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3hao' size='340' side='right'caption='[[3hao]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
<StructureSection load='3hao' size='340' side='right'caption='[[3hao]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3hao]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_halobius_ruber"_klebahn_1919 "bacillus halobius ruber" klebahn 1919]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HAO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HAO FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3hao]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HAO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HAO FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.49&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3han|3han]], [[3hap|3hap]], [[3haq|3haq]], [[3har|3har]], [[3has|3has]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bop, VNG_1467G ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2242 "Bacillus halobius ruber" Klebahn 1919])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hao OCA], [https://pdbe.org/3hao PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hao RCSB], [https://www.ebi.ac.uk/pdbsum/3hao PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hao ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hao OCA], [https://pdbe.org/3hao PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hao RCSB], [https://www.ebi.ac.uk/pdbsum/3hao PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hao ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA]] Light-driven proton pump.
+
[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/3hao_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/3hao_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus halobius ruber klebahn 1919]]
+
[[Category: Halobacterium salinarum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bowie, J U]]
+
[[Category: Bowie JU]]
-
[[Category: Joh, N H]]
+
[[Category: Joh NH]]
-
[[Category: Yang, D]]
+
[[Category: Yang D]]
-
[[Category: Bacteriorhodopsin]]
+
-
[[Category: Cell membrane]]
+
-
[[Category: Chromophore]]
+
-
[[Category: Evolutionary constraint]]
+
-
[[Category: Helical membrane protein]]
+
-
[[Category: Hydrogen ion transport]]
+
-
[[Category: Integral membrane protein]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Membrane]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Packing force]]
+
-
[[Category: Photoreceptor protein]]
+
-
[[Category: Proton transport]]
+
-
[[Category: Pyrrolidone carboxylic acid]]
+
-
[[Category: Receptor]]
+
-
[[Category: Retinal protein]]
+
-
[[Category: Sensory transduction]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+
-
[[Category: Transport protein]]
+
-
[[Category: Van der waal]]
+

Current revision

Crystal structure of bacteriorhodopsin mutant L94A crystallized from bicelles

PDB ID 3hao

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools