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3i0w

From Proteopedia

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Current revision (07:36, 6 September 2023) (edit) (undo)
 
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<StructureSection load='3i0w' size='340' side='right'caption='[[3i0w]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
<StructureSection load='3i0w' size='340' side='right'caption='[[3i0w]], [[Resolution|resolution]] 1.73&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3i0w]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/"clostridium_acetobutyricum"_prevot_1940 "clostridium acetobutyricum" prevot 1940]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I0W FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3i0w]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_acetobutylicum Clostridium acetobutylicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I0W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I0W FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.73&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=8OG:8-OXO-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>8OG</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8OG:8-OXO-2-DEOXY-GUANOSINE-5-MONOPHOSPHATE'>8OG</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3i0x|3i0x]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CAC2707, CA_C2707 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1488 "Clostridium acetobutyricum" Prevot 1940])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0w OCA], [https://pdbe.org/3i0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i0w RCSB], [https://www.ebi.ac.uk/pdbsum/3i0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i0w ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i0w OCA], [https://pdbe.org/3i0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i0w RCSB], [https://www.ebi.ac.uk/pdbsum/3i0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i0w ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q97FM4_CLOAB Q97FM4_CLOAB]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Clostridium acetobutyricum prevot 1940]]
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[[Category: Clostridium acetobutylicum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Doublie, S]]
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[[Category: Doublie S]]
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[[Category: Faucher, F]]
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[[Category: Faucher F]]
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[[Category: 8-oxog]]
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[[Category: Cacogg]]
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[[Category: Cytosine]]
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[[Category: Dna]]
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[[Category: Glycosylase]]
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[[Category: Hydrolase]]
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[[Category: Lyase-dna complex]]
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[[Category: Ogg]]
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Current revision

Crystal structure of Clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in complex with dsDNA containing cytosine opposite to 8-oxoG

PDB ID 3i0w

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