This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k42

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:08, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3k42' size='340' side='right'caption='[[3k42]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='3k42' size='340' side='right'caption='[[3k42]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3k42]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K42 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K42 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3k42]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K42 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K42 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1GP:SN-GLYCEROL-1-PHOSPHATE'>1GP</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3k41|3k41]], [[3k43|3k43]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1GP:SN-GLYCEROL-1-PHOSPHATE'>1GP</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">M6PR ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 BOVIN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k42 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k42 OCA], [https://pdbe.org/3k42 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k42 RCSB], [https://www.ebi.ac.uk/pdbsum/3k42 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k42 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k42 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k42 OCA], [https://pdbe.org/3k42 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k42 RCSB], [https://www.ebi.ac.uk/pdbsum/3k42 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k42 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/MPRD_BOVIN MPRD_BOVIN]] Transport of phosphorylated lysosomal enzymes from the Golgi complex and the cell surface to lysosomes. Lysosomal enzymes bearing phosphomannosyl residues bind specifically to mannose-6-phosphate receptors in the Golgi apparatus and the resulting receptor-ligand complex is transported to an acidic prelyosomal compartment where the low pH mediates the dissociation of the complex.
+
[https://www.uniprot.org/uniprot/MPRD_BOVIN MPRD_BOVIN] Transport of phosphorylated lysosomal enzymes from the Golgi complex and the cell surface to lysosomes. Lysosomal enzymes bearing phosphomannosyl residues bind specifically to mannose-6-phosphate receptors in the Golgi apparatus and the resulting receptor-ligand complex is transported to an acidic prelyosomal compartment where the low pH mediates the dissociation of the complex.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 34: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bovin]]
+
[[Category: Bos taurus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bohnsack, R N]]
+
[[Category: Bohnsack RN]]
-
[[Category: Dahms, N M]]
+
[[Category: Dahms NM]]
-
[[Category: Kim, J J.P]]
+
[[Category: Kim JJP]]
-
[[Category: Olson, L J]]
+
[[Category: Olson LJ]]
-
[[Category: Peterson, F C]]
+
[[Category: Peterson FC]]
-
[[Category: Sun, G]]
+
[[Category: Sun G]]
-
[[Category: Glycoprotein]]
+
-
[[Category: Lysosome]]
+
-
[[Category: Mannose]]
+
-
[[Category: Membrane]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Protein transport]]
+
-
[[Category: Receptor]]
+
-
[[Category: Sugar binding]]
+
-
[[Category: Sugar binding protein]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+

Current revision

Crystal structure of sCD-MPR mutant E19Q/K137M pH 7.0

PDB ID 3k42

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools