6kzq
From Proteopedia
(Difference between revisions)
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- | ==== | + | ==structure of PTP-MEG2 and NSF-pY83 peptide complex== |
- | <StructureSection load='6kzq' size='340' side='right'caption='[[6kzq]]' scene=''> | + | <StructureSection load='6kzq' size='340' side='right'caption='[[6kzq]], [[Resolution|resolution]] 1.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6kzq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KZQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6KZQ FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6kzq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kzq OCA], [https://pdbe.org/6kzq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6kzq RCSB], [https://www.ebi.ac.uk/pdbsum/6kzq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6kzq ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6kzq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kzq OCA], [https://pdbe.org/6kzq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6kzq RCSB], [https://www.ebi.ac.uk/pdbsum/6kzq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6kzq ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/PTN9_HUMAN PTN9_HUMAN] Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Tyrosine phosphorylation of secretion machinery proteins is a crucial regulatory mechanism for exocytosis. However, the participation of protein tyrosine phosphatases (PTPs) in different exocytosis stages has not been defined. Here we demonstrate that PTP-MEG2 controls multiple steps of catecholamine secretion. Biochemical and crystallographic analyses reveal key residues that govern the interaction between PTP-MEG2 and its substrate, a peptide containing the phosphorylated NSF-pY(83) site, specify PTP-MEG2 substrate selectivity, and modulate the fusion of catecholamine-containing vesicles. Unexpectedly, delineation of PTP-MEG2 mutants along with the NSF binding interface reveals that PTP-MEG2 controls the fusion pore opening through NSF independent mechanisms. Utilizing bioinformatics search and biochemical and electrochemical screening approaches, we uncover that PTP-MEG2 regulates the opening and extension of the fusion pore by dephosphorylating the DYNAMIN2-pY(125) and MUNC18-1-pY(145) sites. Further structural and biochemical analyses confirmed the interaction of PTP-MEG2 with MUNC18-1-pY(145) or DYNAMIN2-pY(125) through a distinct structural basis compared with that of the NSF-pY(83) site. Our studies thus provide mechanistic insights in complex exocytosis processes. | ||
+ | |||
+ | PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.,Xu YF, Chen X, Yang Z, Xiao P, Liu CH, Li KS, Yang XZ, Wang YJ, Zhu ZL, Xu ZG, Zhang S, Wang C, Song YC, Zhao WD, Wang CH, Ji ZL, Zhang ZY, Cui M, Sun JP, Yu X EMBO Rep. 2021 May 5;22(5):e52141. doi: 10.15252/embr.202052141. Epub 2021 Mar , 25. PMID:33764618<ref>PMID:33764618</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6kzq" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Chen X]] |
+ | [[Category: Sun JP]] | ||
+ | [[Category: Xu YF]] | ||
+ | [[Category: Yu X]] |
Revision as of 10:47, 22 November 2023
structure of PTP-MEG2 and NSF-pY83 peptide complex
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Categories: Homo sapiens | Large Structures | Chen X | Sun JP | Xu YF | Yu X