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7r96
From Proteopedia
(Difference between revisions)
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| - | ==== | + | ==Self-Assembled 3D DNA Hexagonal Tensegrity Triangle== |
| - | <StructureSection load='7r96' size='340' side='right'caption='[[7r96]]' scene=''> | + | <StructureSection load='7r96' size='340' side='right'caption='[[7r96]], [[Resolution|resolution]] 5.68Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7r96]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7R96 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7R96 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7r96 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7r96 OCA], [https://pdbe.org/7r96 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7r96 RCSB], [https://www.ebi.ac.uk/pdbsum/7r96 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7r96 ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 5.68Å</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7r96 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7r96 OCA], [https://pdbe.org/7r96 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7r96 RCSB], [https://www.ebi.ac.uk/pdbsum/7r96 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7r96 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The tensegrity triangle motif utilizes Watson-Crick sticky end cohesion to self-assemble into a rhombohedral crystal lattice using complementary 5'-GA and 5'-TC sticky ends. Here, we report that using noncanonical 5'-AG and 5'-TC sticky ends in otherwise isomorphic tensegrity triangles results in crystal self-assembly in the P6(3) hexagonal space group as revealed by X-ray crystallography. In this structure, the DNA double helices bend at the crossover positions, a feature that was not observed in the original design. Instead of propagating linearly, the tilt between base pairs of each right-handed helix results in a left-handed superstructure along the screw axis, forming a microtubule-like structure composed of three double helices with an unbroken channel at the center. This hexagonal lattice has a cavity diameter of 11 nm and a unit cell volume of 886â¯000 A(3)-far larger than the rhombohedral counterpart (5 nm, 330â¯000 A(3)). | ||
| + | |||
| + | 3D Hexagonal Arrangement of DNA Tensegrity Triangles.,Lu B, Vecchioni S, Ohayon YP, Sha R, Woloszyn K, Yang B, Mao C, Seeman NC ACS Nano. 2021 Oct 26;15(10):16788-16793. doi: 10.1021/acsnano.1c06963. Epub 2021 , Oct 5. PMID:34609128<ref>PMID:34609128</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7r96" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Synthetic construct]] |
| + | [[Category: Lu B]] | ||
| + | [[Category: Mao C]] | ||
| + | [[Category: Ohayon YP]] | ||
| + | [[Category: Seeman NC]] | ||
| + | [[Category: Sha R]] | ||
| + | [[Category: Vecchioni S]] | ||
Current revision
Self-Assembled 3D DNA Hexagonal Tensegrity Triangle
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Categories: Large Structures | Synthetic construct | Lu B | Mao C | Ohayon YP | Seeman NC | Sha R | Vecchioni S
