This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1vm9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:04, 28 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1vm9' size='340' side='right'caption='[[1vm9]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
<StructureSection load='1vm9' size='340' side='right'caption='[[1vm9]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1vm9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_25411 Atcc 25411]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VM9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VM9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1vm9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_mendocina Pseudomonas mendocina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VM9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VM9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.48&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tmoC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300 ATCC 25411])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vm9 OCA], [https://pdbe.org/1vm9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vm9 RCSB], [https://www.ebi.ac.uk/pdbsum/1vm9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vm9 ProSAT], [https://www.topsan.org/Proteins/CESG/1vm9 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vm9 OCA], [https://pdbe.org/1vm9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vm9 RCSB], [https://www.ebi.ac.uk/pdbsum/1vm9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vm9 ProSAT], [https://www.topsan.org/Proteins/CESG/1vm9 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/TMOC_PSEME TMOC_PSEME]] Probable electron transfer from NADPH, via FAD and the 2Fe-2S center, to the oxygenase activity site of the enzyme.
+
[https://www.uniprot.org/uniprot/TMOC_PSEME TMOC_PSEME] Probable electron transfer from NADPH, via FAD and the 2Fe-2S center, to the oxygenase activity site of the enzyme.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 37:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 25411]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Allard, S T.M]]
+
[[Category: Pseudomonas mendocina]]
-
[[Category: Bingman, C A]]
+
[[Category: Allard STM]]
-
[[Category: Structural genomic]]
+
[[Category: Bingman CA]]
-
[[Category: Fox, B G]]
+
[[Category: Fox BG]]
-
[[Category: Moe, L A]]
+
[[Category: Moe LA]]
-
[[Category: Phillips, G N]]
+
[[Category: Phillips Jr GN]]
-
[[Category: Smith, D W]]
+
[[Category: Smith DW]]
-
[[Category: Wesenberg, G E]]
+
[[Category: Wesenberg GE]]
-
[[Category: Cesg]]
+
-
[[Category: Electron transport]]
+
-
[[Category: Fe]]
+
-
[[Category: Ferredoxin]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Rieske protein]]
+
-
[[Category: Toluene-4-monooxygenase subunit]]
+

Current revision

The X-ray Structure of the cys84ala cys85ala double mutant of the [2Fe-2S] Ferredoxin subunit of Toluene-4-Monooxygenase from Pseudomonas Mendocina KR1

PDB ID 1vm9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1vm9"
Personal tools