3dzk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='3dzk' size='340' side='right'caption='[[3dzk]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
<StructureSection load='3dzk' size='340' side='right'caption='[[3dzk]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3dzk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DZK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3dzk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DZK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NMN:BETA-NICOTINAMIDE+RIBOSE+MONOPHOSPHATE'>NMN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3dzf|3dzf]], [[3dzg|3dzg]], [[3dzh|3dzh]], [[3dzi|3dzi]], [[3dzj|3dzj]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NMN:BETA-NICOTINAMIDE+RIBOSE+MONOPHOSPHATE'>NMN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD38 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/NAD(+)_nucleosidase NAD(+) nucleosidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.5 3.2.2.5] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dzk OCA], [https://pdbe.org/3dzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dzk RCSB], [https://www.ebi.ac.uk/pdbsum/3dzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dzk ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dzk OCA], [https://pdbe.org/3dzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dzk RCSB], [https://www.ebi.ac.uk/pdbsum/3dzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dzk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/CD38_HUMAN CD38_HUMAN]] Synthesizes cyclic ADP-ribose, a second messenger for glucose-induced insulin secretion. Also has cADPr hydrolase activity. Also moonlights as a receptor in cells of the immune system.
+
[https://www.uniprot.org/uniprot/CD38_HUMAN CD38_HUMAN] Synthesizes cyclic ADP-ribose, a second messenger for glucose-induced insulin secretion. Also has cADPr hydrolase activity. Also moonlights as a receptor in cells of the immune system.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 38: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Graeff, R]]
+
[[Category: Graeff R]]
-
[[Category: Hao, Q]]
+
[[Category: Hao Q]]
-
[[Category: Jiang, H]]
+
[[Category: Jiang H]]
-
[[Category: Kriksunov, I A]]
+
[[Category: Kriksunov IA]]
-
[[Category: Lee, H C]]
+
[[Category: Lee HC]]
-
[[Category: Lin, H]]
+
[[Category: Lin H]]
-
[[Category: Liu, Q]]
+
[[Category: Liu Q]]
-
[[Category: Alpha bundle]]
+
-
[[Category: Alternative splicing]]
+
-
[[Category: Beta sheet]]
+
-
[[Category: Diabetes mellitus]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Membrane]]
+
-
[[Category: Nad]]
+
-
[[Category: Nmn complex]]
+
-
[[Category: Polymorphism]]
+
-
[[Category: Receptor]]
+
-
[[Category: Signal-anchor]]
+
-
[[Category: Transmembrane]]
+

Revision as of 12:55, 30 August 2023

Crystal structure of human CD38 extracellular domain, NMN complex

PDB ID 3dzk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools