This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fyh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:53, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3fyh' size='340' side='right'caption='[[3fyh]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3fyh' size='340' side='right'caption='[[3fyh]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3fyh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_33273 Atcc 33273]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FYH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FYH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3fyh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanococcus_voltae Methanococcus voltae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FYH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FYH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=W:TUNGSTEN+ION'>W</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2f1j|2f1j]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=W:TUNGSTEN+ION'>W</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">radA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2188 ATCC 33273])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fyh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fyh OCA], [https://pdbe.org/3fyh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fyh RCSB], [https://www.ebi.ac.uk/pdbsum/3fyh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fyh ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fyh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fyh OCA], [https://pdbe.org/3fyh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fyh RCSB], [https://www.ebi.ac.uk/pdbsum/3fyh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fyh ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/RADA_METVO RADA_METVO]] Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (By similarity).
+
[https://www.uniprot.org/uniprot/RADA_METVO RADA_METVO] Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 33273]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: He, Y]]
+
[[Category: Methanococcus voltae]]
-
[[Category: Li, Y]]
+
[[Category: He Y]]
-
[[Category: Luo, Y]]
+
[[Category: Li Y]]
-
[[Category: Atp-binding]]
+
[[Category: Luo Y]]
-
[[Category: Atpase]]
+
-
[[Category: Dna damage]]
+
-
[[Category: Dna recombination]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Rad51]]
+
-
[[Category: Rada]]
+
-
[[Category: Rada-inhibitor complex]]
+
-
[[Category: Reca]]
+
-
[[Category: Recombinase]]
+
-
[[Category: Recombination]]
+

Current revision

Recombinase in complex with ADP and metatungstate

PDB ID 3fyh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3fyh"
Personal tools