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2gjp

From Proteopedia

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Current revision (09:41, 30 August 2023) (edit) (undo)
 
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<StructureSection load='2gjp' size='340' side='right'caption='[[2gjp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='2gjp' size='340' side='right'caption='[[2gjp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2gjp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_700165 Atcc 700165]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GJP FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2gjp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sutcliffiella_halmapala Sutcliffiella halmapala]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GJP FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=DAF:4,6-DIDEOXY-4-{[(1S,5R,6S)-3-FORMYL-5,6-DIHYDROXY-4-OXOCYCLOHEX-2-EN-1-YL]AMINO}-ALPHA-D-XYLO-HEX-5-ENOPYRANOSE'>DAF</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1w9x|1w9x]], [[2gjr|2gjr]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DAF:4,6-DIDEOXY-4-{[(1S,5R,6S)-3-FORMYL-5,6-DIHYDROXY-4-OXOCYCLOHEX-2-EN-1-YL]AMINO}-ALPHA-D-XYLO-HEX-5-ENOPYRANOSE'>DAF</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRD_900001:alpha-maltose'>PRD_900001</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gjp OCA], [https://pdbe.org/2gjp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gjp RCSB], [https://www.ebi.ac.uk/pdbsum/2gjp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gjp ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gjp OCA], [https://pdbe.org/2gjp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gjp RCSB], [https://www.ebi.ac.uk/pdbsum/2gjp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gjp ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/AMT6_BACS7 AMT6_BACS7]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Alpha-amylase]]
 
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[[Category: Atcc 700165]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Harris, P]]
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[[Category: Sutcliffiella halmapala]]
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[[Category: Hobley, T J]]
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[[Category: Harris P]]
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[[Category: Kaasgaard, S G]]
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[[Category: Hobley TJ]]
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[[Category: Lyhne-Iversen, L]]
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[[Category: Kaasgaard SG]]
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[[Category: Bacillus halmapalus]]
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[[Category: Lyhne-Iversen L]]
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[[Category: Hydrolase]]
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[[Category: Maltose binding site]]
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Current revision

Structure of Bacillus halmapalus alpha-amylase, crystallized with the substrate analogue acarbose and maltose

PDB ID 2gjp

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