7nk7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:56, 14 July 2024) (edit) (undo)
 
Line 1: Line 1:
-
====
+
==Mycobacterium smegmatis ATP synthase F1 state 1==
-
<StructureSection load='7nk7' size='340' side='right'caption='[[7nk7]]' scene=''>
+
<StructureSection load='7nk7' size='340' side='right'caption='[[7nk7]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7nk7]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis_MC2_155 Mycolicibacterium smegmatis MC2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NK7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NK7 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7nk7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7nk7 OCA], [https://pdbe.org/7nk7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7nk7 RCSB], [https://www.ebi.ac.uk/pdbsum/7nk7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7nk7 ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7nk7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7nk7 OCA], [https://pdbe.org/7nk7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7nk7 RCSB], [https://www.ebi.ac.uk/pdbsum/7nk7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7nk7 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ATPA_MYCS2 ATPA_MYCS2] Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.[HAMAP-Rule:MF_01346]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The structure has been determined by electron cryomicroscopy of the adenosine triphosphate (ATP) synthase from Mycobacterium smegmatis This analysis confirms features in a prior description of the structure of the enzyme, but it also describes other highly significant attributes not recognized before that are crucial for understanding the mechanism and regulation of the mycobacterial enzyme. First, we resolved not only the three main states in the catalytic cycle described before but also eight substates that portray structural and mechanistic changes occurring during a 360 degrees catalytic cycle. Second, a mechanism of auto-inhibition of ATP hydrolysis involves not only the engagement of the C-terminal region of an alpha-subunit in a loop in the gamma-subunit, as proposed before, but also a "fail-safe" mechanism involving the b'-subunit in the peripheral stalk that enhances engagement. A third unreported characteristic is that the fused bdelta-subunit contains a duplicated domain in its N-terminal region where the two copies of the domain participate in similar modes of attachment of the two of three N-terminal regions of the alpha-subunits. The auto-inhibitory plus the associated "fail-safe" mechanisms and the modes of attachment of the alpha-subunits provide targets for development of innovative antitubercular drugs. The structure also provides support for an observation made in the bovine ATP synthase that the transmembrane proton-motive force that provides the energy to drive the rotary mechanism is delivered directly and tangentially to the rotor via a Grotthuss water chain in a polar L-shaped tunnel.
 +
 +
Structure of the ATP synthase from Mycobacterium smegmatis provides targets for treating tuberculosis.,Montgomery MG, Petri J, Spikes TE, Walker JE Proc Natl Acad Sci U S A. 2021 Nov 23;118(47):e2111899118. doi: , 10.1073/pnas.2111899118. PMID:34782468<ref>PMID:34782468</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 7nk7" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[ATPase 3D structures|ATPase 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Z-disk]]
+
[[Category: Mycolicibacterium smegmatis MC2 155]]
 +
[[Category: Montgomery MG]]
 +
[[Category: Petri J]]
 +
[[Category: Spikes TE]]
 +
[[Category: Walker JE]]

Current revision

Mycobacterium smegmatis ATP synthase F1 state 1

PDB ID 7nk7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools