1jvi
From Proteopedia
(Difference between revisions)
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<StructureSection load='1jvi' size='340' side='right'caption='[[1jvi]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='1jvi' size='340' side='right'caption='[[1jvi]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1jvi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1jvi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JVI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JVI FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC+ACID'>HCS</scene>, <scene name='pdbligand=RHC:5-(3-AMINO-4,4-DIHYROXY-BUTYLSULFANYLMETHYL)-TETRAHYDRO-FURAN-2,3,4-TRIOL'>RHC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC+ACID'>HCS</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene>, <scene name='pdbligand=RHC:5-(3-AMINO-4,4-DIHYROXY-BUTYLSULFANYLMETHYL)-TETRAHYDRO-FURAN-2,3,4-TRIOL'>RHC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jvi OCA], [https://pdbe.org/1jvi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jvi RCSB], [https://www.ebi.ac.uk/pdbsum/1jvi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jvi ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jvi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jvi OCA], [https://pdbe.org/1jvi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jvi RCSB], [https://www.ebi.ac.uk/pdbsum/1jvi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jvi ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/LUXS_BACSU LUXS_BACSU] Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).[HAMAP-Rule:MF_00091] | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Bacillus subtilis]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Baker | + | [[Category: Baker PJ]] |
- | [[Category: Blackburn | + | [[Category: Blackburn GM]] |
- | [[Category: Cox | + | [[Category: Cox AG]] |
- | [[Category: Das | + | [[Category: Das SK]] |
- | [[Category: Foster | + | [[Category: Foster SJ]] |
- | [[Category: Hartley | + | [[Category: Hartley A]] |
- | [[Category: Horsburgh | + | [[Category: Horsburgh MJ]] |
- | [[Category: McCleod | + | [[Category: McCleod CW]] |
- | [[Category: Mekhalfia | + | [[Category: Mekhalfia A]] |
- | [[Category: Rice | + | [[Category: Rice DW]] |
- | [[Category: Ruzheinikov | + | [[Category: Ruzheinikov SN]] |
- | [[Category: Sedelnikova | + | [[Category: Sedelnikova SE]] |
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Revision as of 08:46, 16 August 2023
THE 2.2 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/RIBOSILHOMOCYSTEINE COMPLEX
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Categories: Bacillus subtilis | Large Structures | Baker PJ | Blackburn GM | Cox AG | Das SK | Foster SJ | Hartley A | Horsburgh MJ | McCleod CW | Mekhalfia A | Rice DW | Ruzheinikov SN | Sedelnikova SE