7k3c
From Proteopedia
(Difference between revisions)
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==SGMGGIT segment 58-64 from Keratin-8== | ==SGMGGIT segment 58-64 from Keratin-8== | ||
| - | <StructureSection load='7k3c' size='340' side='right'caption='[[7k3c]]' scene=''> | + | <StructureSection load='7k3c' size='340' side='right'caption='[[7k3c]], [[Resolution|resolution]] 1.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7K3C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7K3C FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7k3c]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7K3C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7K3C FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7k3c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k3c OCA], [https://pdbe.org/7k3c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7k3c RCSB], [https://www.ebi.ac.uk/pdbsum/7k3c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7k3c ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7k3c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7k3c OCA], [https://pdbe.org/7k3c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7k3c RCSB], [https://www.ebi.ac.uk/pdbsum/7k3c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7k3c ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Proteins including FUS, hnRNPA2, and TDP-43 reversibly aggregate into amyloid-like fibrils through interactions of their low-complexity domains (LCDs). Mutations in LCDs can promote irreversible amyloid aggregation and disease. We introduce a computational approach to identify mutations in LCDs of disease-associated proteins predicted to increase propensity for amyloid aggregation. We identify several disease-related mutations in the intermediate filament protein keratin-8 (KRT8). Atomic structures of wild-type and mutant KRT8 segments confirm the transition to a pleated strand capable of amyloid formation. Biochemical analysis reveals KRT8 forms amyloid aggregates, and the identified mutations promote aggregation. Aggregated KRT8 is found in Mallory-Denk bodies, observed in hepatocytes of livers with alcoholic steatohepatitis (ASH). We demonstrate that ethanol promotes KRT8 aggregation, and KRT8 amyloids co-crystallize with alcohol. Lastly, KRT8 aggregation can be seeded by liver extract from people with ASH, consistent with the amyloid nature of KRT8 aggregates and the classification of ASH as an amyloid-related condition. | ||
| + | |||
| + | Identifying amyloid-related diseases by mapping mutations in low-complexity protein domains to pathologies.,Murray KA, Hughes MP, Hu CJ, Sawaya MR, Salwinski L, Pan H, French SW, Seidler PM, Eisenberg DS Nat Struct Mol Biol. 2022 May 30. pii: 10.1038/s41594-022-00774-y. doi:, 10.1038/s41594-022-00774-y. PMID:35637421<ref>PMID:35637421</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7k3c" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Eisenberg | + | [[Category: Eisenberg, D S]] |
| - | [[Category: Murray | + | [[Category: Murray, K A]] |
| - | [[Category: Sawaya | + | [[Category: Sawaya, M R]] |
| + | [[Category: Amyloid filament]] | ||
| + | [[Category: Low complexity sequence]] | ||
| + | [[Category: Protein fibril]] | ||
Revision as of 05:17, 15 June 2022
SGMGGIT segment 58-64 from Keratin-8
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