1z50

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<StructureSection load='1z50' size='340' side='right'caption='[[1z50]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='1z50' size='340' side='right'caption='[[1z50]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1z50]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z50 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1z50]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mammalian_orthorubulavirus_5 Mammalian orthorubulavirus 5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z50 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1z4v|1z4v]], [[1z4x|1z4x]], [[1z4w|1z4w]], [[1z4z|1z4z]], [[1z4y|1z4y]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Exo-alpha-sialidase Exo-alpha-sialidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.18 3.2.1.18] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z50 OCA], [https://pdbe.org/1z50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z50 RCSB], [https://www.ebi.ac.uk/pdbsum/1z50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z50 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z50 OCA], [https://pdbe.org/1z50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z50 RCSB], [https://www.ebi.ac.uk/pdbsum/1z50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z50 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/HN_SV5 HN_SV5]] Attaches the virus to sialic acid-containing cell receptors and thereby initiating infection. Binding of HN protein to the receptor induces a conformational change that allows the F protein to trigger virion/cell membranes fusion (By similarity). Neuraminidase activity ensures the efficient spread of the virus by dissociating the mature virions from the neuraminic acid containing glycoproteins (By similarity).
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[https://www.uniprot.org/uniprot/HN_PIV5 HN_PIV5] Attaches the virus to sialic acid-containing cell receptors and thereby initiating infection. Binding of HN protein to the receptor induces a conformational change that allows the F protein to trigger virion/cell membranes fusion (By similarity). Neuraminidase activity ensures the efficient spread of the virus by dissociating the mature virions from the neuraminic acid containing glycoproteins.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Exo-alpha-sialidase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Jardetzky, T S]]
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[[Category: Mammalian orthorubulavirus 5]]
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[[Category: Lamb, R A]]
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[[Category: Jardetzky TS]]
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[[Category: Paterson, R G]]
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[[Category: Lamb RA]]
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[[Category: Thompson, T B]]
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[[Category: Paterson RG]]
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[[Category: Wurzburg, B A]]
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[[Category: Thompson TB]]
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[[Category: Yuan, P]]
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[[Category: Wurzburg BA]]
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[[Category: Fusion]]
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[[Category: Yuan P]]
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[[Category: Hemagglutinin]]
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[[Category: Hydrolase]]
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[[Category: Neuraminidase]]
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[[Category: Tetramer]]
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Revision as of 07:03, 23 August 2023

Parainfluenza Virus 5 (SV5) Hemagglutinin-Neuraminidase (HN) with ligand DANA (soaked with sialic acid, pH 8.0)

PDB ID 1z50

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OCA

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