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1zoi
From Proteopedia
(Difference between revisions)
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<StructureSection load='1zoi' size='340' side='right'caption='[[1zoi]], [[Resolution|resolution]] 1.60Å' scene=''> | <StructureSection load='1zoi' size='340' side='right'caption='[[1zoi]], [[Resolution|resolution]] 1.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1zoi]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1zoi]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZOI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZOI FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zoi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zoi OCA], [https://pdbe.org/1zoi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zoi RCSB], [https://www.ebi.ac.uk/pdbsum/1zoi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zoi ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zoi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zoi OCA], [https://pdbe.org/1zoi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zoi RCSB], [https://www.ebi.ac.uk/pdbsum/1zoi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zoi ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q3HWU8_PSEPU Q3HWU8_PSEPU] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zoi ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zoi ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | Esterase (EST) from Pseudomonas putida IFO12996 catalyzes the stereoselective hydrolysis of methyl dl-beta-acetylthioisobutyrate (dl-MATI) to produce d-beta-acetylthioisobutyric acid (DAT), serving as a key intermediate for the synthesis of angiotensin-converting enzyme inhibitors. The EST gene was cloned and expressed in Escherichia coli; the recombinant protein is a non-disulfide-linked homotrimer with a monomer molecular weight of 33,000 in both solution and crystalline states, indicating that these ESTs function as trimers. EST hydrolyzed dl-MATI to produce DAT with a degree of conversion of 49.5% and an enantiomeric excess value of 97.2% at an optimum pH of about 8 to 10 and an optimum temperature of about 57 to 67 degrees C. The crystal structure of EST has been determined by X-ray diffraction to a resolution of 1.6 A, confirming that EST is a member of the alpha/beta hydrolase fold superfamily of enzymes and includes a catalytic triad of Ser97, Asp227, and His256. The active site is located approximately in the middle of the molecule at the end of a pocket approximately 12 A deep. EST can hydrolyze the methyl ester group without affecting the acetylthiol ester moiety in dl-MATI. The examination of substrate specificity of EST toward other linear esters revealed that the enzyme showed specific activity toward methyl esters and that it recognized the configuration at C-2. | ||
| - | |||
| - | Stereoselective esterase from Pseudomonas putida IFO12996 reveals alpha/beta hydrolase folds for D-beta-acetylthioisobutyric acid synthesis.,Elmi F, Lee HT, Huang JY, Hsieh YC, Wang YL, Chen YJ, Shaw SY, Chen CJ J Bacteriol. 2005 Dec;187(24):8470-6. PMID:16321951<ref>PMID:16321951</ref> | ||
| - | |||
| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 1zoi" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Bacillus fluorescens putidus flugge 1886]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Chen, C J]] | ||
| - | [[Category: Chen, Y J]] | ||
| - | [[Category: Elmi, F]] | ||
| - | [[Category: Hsieh, Y C]] | ||
| - | [[Category: Huang, J Y]] | ||
| - | [[Category: Lee, H T]] | ||
| - | [[Category: Shaw, S Y]] | ||
| - | [[Category: Wang, Y L]] | ||
| - | [[Category: Alpha/beta hydrolase fold]] | ||
| - | [[Category: Esterase]] | ||
| - | [[Category: Hydrolase]] | ||
[[Category: Pseudomonas putida]] | [[Category: Pseudomonas putida]] | ||
| + | [[Category: Chen CJ]] | ||
| + | [[Category: Chen YJ]] | ||
| + | [[Category: Elmi F]] | ||
| + | [[Category: Hsieh YC]] | ||
| + | [[Category: Huang JY]] | ||
| + | [[Category: Lee HT]] | ||
| + | [[Category: Shaw SY]] | ||
| + | [[Category: Wang YL]] | ||
Current revision
Crystal Structure of a Stereoselective Esterase from Pseudomonas putida IFO12996
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Categories: Large Structures | Pseudomonas putida | Chen CJ | Chen YJ | Elmi F | Hsieh YC | Huang JY | Lee HT | Shaw SY | Wang YL

