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| <StructureSection load='7ojr' size='340' side='right'caption='[[7ojr]], [[Resolution|resolution]] 3.05Å' scene=''> | | <StructureSection load='7ojr' size='340' side='right'caption='[[7ojr]], [[Resolution|resolution]] 3.05Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[7ojr]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OJR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OJR FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7ojr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OJR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OJR FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.05Å</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphoglucosamine_mutase Phosphoglucosamine mutase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.10 5.4.2.10] </span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ojr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ojr OCA], [https://pdbe.org/7ojr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ojr RCSB], [https://www.ebi.ac.uk/pdbsum/7ojr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ojr ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ojr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ojr OCA], [https://pdbe.org/7ojr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ojr RCSB], [https://www.ebi.ac.uk/pdbsum/7ojr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ojr ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[https://www.uniprot.org/uniprot/GLMM_BACSU GLMM_BACSU]] Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (By similarity). Glucosamine-1-phosphate is used for cell wall biosynthesis (Probable).[HAMAP-Rule:MF_01554]<ref>PMID:26240071</ref>
| + | [https://www.uniprot.org/uniprot/GLMM_BACSU GLMM_BACSU] Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (By similarity). Glucosamine-1-phosphate is used for cell wall biosynthesis (Probable).[HAMAP-Rule:MF_01554]<ref>PMID:26240071</ref> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
| + | [[Category: Bacillus subtilis subsp. subtilis str. 168]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Phosphoglucosamine mutase]]
| + | [[Category: Freemont P]] |
- | [[Category: Freemont, P]] | + | [[Category: Grundling AG]] |
- | [[Category: Grundling, A G]] | + | [[Category: Pathania M]] |
- | [[Category: Pathania, M]] | + | |
- | [[Category: C-di-amp]]
| + | |
- | [[Category: Diadenylate cyclase]]
| + | |
- | [[Category: Glucosamine-1-phosphate]]
| + | |
- | [[Category: Glucosamine-6-phosphate]]
| + | |
- | [[Category: Isomerase]]
| + | |
- | [[Category: Transferase]]
| + | |
| Structural highlights
Function
GLMM_BACSU Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (By similarity). Glucosamine-1-phosphate is used for cell wall biosynthesis (Probable).[HAMAP-Rule:MF_01554][1]
Publication Abstract from PubMed
Cyclic-di-adenosine monophosphate (c-di-AMP) is an important nucleotide signaling molecule that plays a key role in osmotic regulation in bacteria. c-di-AMP is produced from two molecules of ATP by proteins containing a diadenylate cyclase (DAC) domain. In Bacillus subtilis, the main c-di-AMP cyclase, CdaA, is a membrane-linked cyclase with an N-terminal transmembrane domain followed by the cytoplasmic DAC domain. As both high and low levels of c-di-AMP have a negative impact on bacterial growth, the cellular levels of this signaling nucleotide are tightly regulated. Here we investigated how the activity of the B. subtilis CdaA is regulated by the phosphoglucomutase GlmM, which has been shown to interact with the c-di-AMP cyclase. Using the soluble B. subtilis CdaACD catalytic domain and purified full-length GlmM or the GlmMF369 variant lacking the C-terminal flexible domain 4, we show that the cyclase and phosphoglucomutase form a stable complex in vitro and that GlmM is a potent cyclase inhibitor. We determined the crystal structure of the individual B. subtilis CdaACD and GlmM homodimers and of the CdaACD:GlmMF369 complex. In the complex structure, a CdaACD dimer is bound to a GlmMF369 dimer in such a manner that GlmM blocks the oligomerization of CdaACD and formation of active head-to-head cyclase oligomers, thus suggesting a mechanism by which GlmM acts as a cyclase inhibitor. As the amino acids at the CdaACD:GlmM interphase are conserved, we propose that the observed mechanism of inhibition of CdaA by GlmM may also be conserved among Firmicutes.
Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.,Pathania M, Tosi T, Millership C, Hoshiga F, Morgan RML, Freemont PS, Grundling A J Biol Chem. 2021 Oct 20;297(5):101317. doi: 10.1016/j.jbc.2021.101317. PMID:34678313[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Gundlach J, Mehne FM, Herzberg C, Kampf J, Valerius O, Kaever V, Stulke J. An Essential Poison: Synthesis and Degradation of Cyclic Di-AMP in Bacillus subtilis. J Bacteriol. 2015 Oct;197(20):3265-74. doi: 10.1128/JB.00564-15. Epub 2015 Aug 3. PMID:26240071 doi:http://dx.doi.org/10.1128/JB.00564-15
- ↑ Pathania M, Tosi T, Millership C, Hoshiga F, Morgan RML, Freemont PS, Grundling A. Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM. J Biol Chem. 2021 Oct 20;297(5):101317. doi: 10.1016/j.jbc.2021.101317. PMID:34678313 doi:http://dx.doi.org/10.1016/j.jbc.2021.101317
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