2xyb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:05, 23 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2xyb' size='340' side='right'caption='[[2xyb]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='2xyb' size='340' side='right'caption='[[2xyb]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XYB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trametes_cinnabarina Trametes cinnabarina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XYB FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Laccase Laccase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [https://pdbe.org/2xyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [https://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [https://pdbe.org/2xyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [https://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/Q9UVQ2_PYCCI Q9UVQ2_PYCCI]
-
Laccase isozymes from the white-rot basidiomycete fungi Trametes versicolor and Pycnoporus cinnabarinus were purified to apparent iso-electric homogeneity and crystallised. T. versicolor laccase crystallises in two crystal forms, both with the orthorhombic space group P2(1)2(1)2(1), which diffract to 1.9 and 2.95 A resolution, respectively. The crystals of P. cinnabarinus laccase belong to the monoclinic space group C2 and diffract to at least 2.2 A resolution. All the laccase crystals are suitable for X-ray structure determination and contain a full complement of copper ions.
+
-
 
+
-
Purification, crystallisation and X-ray diffraction study of fully functional laccases from two ligninolytic fungi.,Antorini M, Herpoel-Gimbert I, Choinowski T, Sigoillot JC, Asther M, Winterhalter K, Piontek K Biochim Biophys Acta. 2002 Jan 31;1594(1):109-14. PMID:11825613<ref>PMID:11825613</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 2xyb" style="background-color:#fffaf0;"></div>
+
==See Also==
==See Also==
*[[Laccase 3D structures|Laccase 3D structures]]
*[[Laccase 3D structures|Laccase 3D structures]]
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Laccase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pycnoporus cinnabarinus]]
+
[[Category: Trametes cinnabarina]]
-
[[Category: Antorini, M]]
+
[[Category: Antorini M]]
-
[[Category: Asther, M]]
+
[[Category: Asther M]]
-
[[Category: Choinowski, T]]
+
[[Category: Choinowski T]]
-
[[Category: Herpoel-Gimbert, I]]
+
[[Category: Herpoel-Gimbert I]]
-
[[Category: Piontek, K]]
+
[[Category: Piontek K]]
-
[[Category: Plattner, D A]]
+
[[Category: Plattner DA]]
-
[[Category: Sigoillot, J C]]
+
[[Category: Sigoillot JC]]
-
[[Category: Winterhalter, K]]
+
[[Category: Winterhalter K]]
-
[[Category: Blue multi-copper oxidase]]
+
-
[[Category: Lignin degradation]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Phenol oxidase]]
+

Current revision

CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS

PDB ID 2xyb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2xyb"
Personal tools