7bik
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal structure of YTHDF2 in complex with m6Am== | ==Crystal structure of YTHDF2 in complex with m6Am== | ||
| - | <StructureSection load='7bik' size='340' side='right'caption='[[7bik]]' scene=''> | + | <StructureSection load='7bik' size='340' side='right'caption='[[7bik]], [[Resolution|resolution]] 2.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BIK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BIK FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7bik]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BIK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BIK FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bik FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bik OCA], [https://pdbe.org/7bik PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bik RCSB], [https://www.ebi.ac.uk/pdbsum/7bik PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bik ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TV8:(2~{R},3~{S},4~{R},5~{R})-2-(hydroxymethyl)-4-methoxy-5-[6-(methylamino)purin-9-yl]oxolan-3-ol'>TV8</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bik FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bik OCA], [https://pdbe.org/7bik PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bik RCSB], [https://www.ebi.ac.uk/pdbsum/7bik PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bik ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/YTHD2_HUMAN YTHD2_HUMAN] Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in the efficiency of mRNA splicing, processing and stability. Acts as a regulator of mRNA stability: binding to m6A-containing mRNAs results in the localization of to mRNA decay sites, such as processing bodies (P-bodies), leading to mRNA degradation.<ref>PMID:22575960</ref> <ref>PMID:24284625</ref> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Caflisch A]] | [[Category: Caflisch A]] | ||
[[Category: Wang X]] | [[Category: Wang X]] | ||
Current revision
Crystal structure of YTHDF2 in complex with m6Am
| |||||||||||
