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Nucleoprotein 3D structures

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Line 9: Line 9:
**[[1yvr]] – XlNP Ro – ''Xenopus laevis''<br />
**[[1yvr]] – XlNP Ro – ''Xenopus laevis''<br />
**[[3ouo]], [[3ov9]] – NP – Rift valley fever virus<br />
**[[3ouo]], [[3ov9]] – NP – Rift valley fever virus<br />
-
**[[3q7b]], [[3q7c]] – LvNP exonuclease domain – Lassa virus<br />
+
**[[3q7b]], [[3q7c]], [[7v37]] – LvNP exonuclease domain 342-569 – Lassa virus<br />
**[[3mwp]], [[3mwt]], [[3r3l]] – LvNP<br />
**[[3mwp]], [[3mwt]], [[3r3l]] – LvNP<br />
 +
**[[7v3a]] – LvNP (mutant)<br />
**[[3pto]] - VvNP – Vesicular stomatitis Indiana virus<br />
**[[3pto]] - VvNP – Vesicular stomatitis Indiana virus<br />
**[[2qvj]] – VvNP (mutant)<br />
**[[2qvj]] – VvNP (mutant)<br />
 +
**[[7umk]], [[7uml]], [[7uws]] - VvNP – Cryo EM<br />
**[[5e04]] - AvNP – Andes virus<br />
**[[5e04]] - AvNP – Andes virus<br />
**[[2k48]] – AvNP N terminal - NMR<br />
**[[2k48]] – AvNP N terminal - NMR<br />
**[[6g13]] - McvNP C terminal – MERS coronavirus<br />
**[[6g13]] - McvNP C terminal – MERS coronavirus<br />
**[[6kl2]] - McvNP N terminal <br />
**[[6kl2]] - McvNP N terminal <br />
 +
**[[7n45]] - NP C terminal – HKU1 coronavirus<br />
**[[3hd4]] – NP N terminal – Murine hepatitis virus<br />
**[[3hd4]] – NP N terminal – Murine hepatitis virus<br />
**[[2wfs]], [[2ymn]], [[6i54]], [[6i7b]], [[6i7m]], [[6i85]] – IvNP – Cryo EM – Influenza virus<br />
**[[2wfs]], [[2ymn]], [[6i54]], [[6i7b]], [[6i7m]], [[6i85]] – IvNP – Cryo EM – Influenza virus<br />
-
**[[3zdp]], [[4dyt]] – IvNP (mutant)<br />
+
**[[3zdp]], [[4dyt]], [[7nt8]] – IvNP (mutant)<br />
**[[2q06]], [[2iqh]], [[3tj0]], [[4dys]], [[4iry]], [[5b7b]], [[5n2u]] – IvNP<br />
**[[2q06]], [[2iqh]], [[3tj0]], [[4dys]], [[4iry]], [[5b7b]], [[5n2u]] – IvNP<br />
**[[6ehl]] - EvNP – Zaire Ebola virus – Cryo EM<br />
**[[6ehl]] - EvNP – Zaire Ebola virus – Cryo EM<br />
Line 49: Line 52:
**[[6yjl]] – RsvNP C terminal - NMR<br />
**[[6yjl]] – RsvNP C terminal - NMR<br />
**[[6ydr]] - NP C terminal - Mengla dianlovirus<br />
**[[6ydr]] - NP C terminal - Mengla dianlovirus<br />
 +
**[[8fwl]] - NP – Lyssavirus australis<br />
 +
**[[7xpn]] - SvcNP – Sprivirus cyprinus<br />
 +
**[[7aoy]] – BvNP – Bunyamwera virus – Cryo EM<br />
 +
**[[7xiv]] - LcvNP – Lloviu cuevavirus <br />
*Nucleoprotein complex with RNA
*Nucleoprotein complex with RNA
Line 58: Line 65:
**[[3hhz]] - VvNP + phosphoprotein + RNA<br />
**[[3hhz]] - VvNP + phosphoprotein + RNA<br />
**[[2wj8]], [[2yhm]], [[4bkk]] – RsvNP + RNA <br />
**[[2wj8]], [[2yhm]], [[4bkk]] – RsvNP + RNA <br />
-
**[[2gtt]] – NP + RNA – Rabies virus<br />
+
**[[2gtt]], [[8ffr]] – RvNP + RNA – Rabies virus<br />
**[[1wwg]], [[1wwd]], [[1wwe]], [[1u6p]] - MvNP P10 + RNA – NMR<br />
**[[1wwg]], [[1wwd]], [[1wwe]], [[1u6p]] - MvNP P10 + RNA – NMR<br />
**[[7dkg]], [[7dxp]] - IvNP + RNA <br />
**[[7dkg]], [[7dxp]] - IvNP + RNA <br />
Line 78: Line 85:
**[[6m7d]] - NP + RNA – Sendai virus – Cryo EM<br />
**[[6m7d]] - NP + RNA – Sendai virus – Cryo EM<br />
**[[6jc3]] - NP + RNA – Avian orthoavulavirus – Cryo EM<br />
**[[6jc3]] - NP + RNA – Avian orthoavulavirus – Cryo EM<br />
 +
**[[7ypw]], [[7yr8]] - LcvNP + RNA – Cryo EM<br />
 +
**[[7f1m]] - LvmvNP + RNA – Cryo EM<br />
 +
**[[7yg7]] - SvcNP + RNA – Cryo EM<br />
*Nucleoprotein complex with antibody
*Nucleoprotein complex with antibody
Line 92: Line 102:
**[[3mx2]], [[3mx5]] – LvNP + nucleotide<br />
**[[3mx2]], [[3mx5]] – LvNP + nucleotide<br />
 +
**[[7v38]], [[7v39]] - LvNP + inhibitor <br />
 +
**[[7v3b]], [[7v3c]] - LvNP (mutant) + inhibitor <br />
**[[2wyy]] – VvNP + poly U – Cryo EM<br />
**[[2wyy]] – VvNP + poly U – Cryo EM<br />
**[[3hhw]], [[3pmk]] – VvNP + phosphoprotein<br />r />
**[[3hhw]], [[3pmk]] – VvNP + phosphoprotein<br />r />
**[[4co6]] - NvNP + phosphoprotein – Nipah virus<br />
**[[4co6]] - NvNP + phosphoprotein – Nipah virus<br />
 +
**[[8b8v]] - RvNP + phosphoprotein <br />
**[[7ev8]] - NP + phosphoprotein – Human respirovirus<br />
**[[7ev8]] - NP + phosphoprotein – Human respirovirus<br />
**[[4ucc]] – RsvNP N terminal + inhibitor<br />
**[[4ucc]] – RsvNP N terminal + inhibitor<br />
Line 109: Line 122:
**[[5fvd]] - HmpvNP + phosphoprotein<br />
**[[5fvd]] - HmpvNP + phosphoprotein<br />
**[[5wkn]] - PivNP + phosphoprotein<br />
**[[5wkn]] - PivNP + phosphoprotein<br />
-
**[[6kl5]], [[6kl6]], [[6lnn]], [[6lz6]], [[6lz8]] – McvNP N terminal + inhibitor<br />
+
**[[6kl5]], [[6kl6]], [[6lnn]], [[6lz6]], [[6lz8]], [[7dyd]] – McvNP N terminal + inhibitor<br />
*Nucleoprotein from SARS-Covid 2
*Nucleoprotein from SARS-Covid 2
-
**[[6vyo]], [[6wkp]], [[6yi3]], [[7cdz]], [[4j3k]], [[5n4k]], [[2ofz]], [[2og3]], [[6m3m]], [[7cdz]], [[7vnu]] - ScvNP N terminal 45-181 – SARS coronavirus 2<br />
+
**[[8fd5]], [[8fg2]] - ScvNP 1-419 – SARS coronavirus 2 – Cryo EM<br />
-
**[[1ssk]] - ScvNP N terminal – NMR<br />
+
**[[6vyo]], [[6wkp]], [[6yi3]], [[7cdz]], [[4j3k]], [[5n4k]], [[2ofz]], [[2og3]], [[6m3m]], [[7cdz]], [[7uw3]], [[7vbd]], [[7vbf]], [[7vnu]], [[7xx1]] - ScvNP N terminal 45-181 <br />
-
**[[6wji]], [[6wzo]], [[6wzq]], [[6yun]], [[6zco]], [[7c22]], [[7ce0]], [[5epw]], [[2gib]], [[7c22]], [[7de1]], [[7f2b]], [[7f2e]] - ScvNP C terminal dimerization domain 257-364 <br />
+
**[[1ssk]], [[7sd4]] - ScvNP N terminal – NMR<br />
-
**[[2jw8]] - ScvNP C terminal dimerization domain - NMR <br />
+
**[[7acs]], [[7act]] - ScvNP N terminal + RNA - NMR<br />
**[[7acs]], [[7act]] - ScvNP N terminal + RNA - NMR<br />
-
**[[7cr5]], [[7n3c]], [[7n3d]] - ScvNP N-terminal + antibody <br />
+
**[[7cr5]], [[7n3c]], [[7n3d]], [[7str]], [[7sts]], [[7sue]] - ScvNP N-terminal + antibody <br />
**[[7n0r]], [[7r98]] – ScvNP N-terminal + nanobody <br />
**[[7n0r]], [[7r98]] – ScvNP N-terminal + nanobody <br />
-
**[[7n0i]] – ScvNP C-terminal + nanobody <br />
 
**[[4kxj]] – ScvNP N terminal + PJ34 <br />
**[[4kxj]] – ScvNP N terminal + PJ34 <br />
-
**[[4li4]], [[4lm7]], [[4lm9]], [[4lmc]] – ScvNP N terminal + nucleotide <br />
+
**[[4li4]], [[4lm7]], [[4lm9]], [[4lmc]], [[7o35]], [[7o36]], [[7xxk]] – ScvNP N terminal + nucleotide <br />
**[[4lmt]] – ScvNP N terminal + quinoline derivative <br />
**[[4lmt]] – ScvNP N terminal + quinoline derivative <br />
-
 
+
**[[6wji]], [[6wzo]], [[6wzq]], [[6yun]], [[6zco]], [[7c22]], [[7ce0]], [[5epw]], [[2gib]], [[7c22]], [[7de1]], [[7f2b]], [[7f2e]], [[7o05]], [[7uxx]], [[7vbe]], [[7xwx]] - ScvNP C terminal dimerization domain 257-364 <br />
 +
**[[2jw8]] - ScvNP C terminal dimerization domain - NMR <br />
 +
**[[7n0i]] – ScvNP C-terminal + nanobody <br />
 +
**[[7uxz]] – ScvNP C-terminal + chicoric acid <br />
*'''Ribonucleoprotein'''
*'''Ribonucleoprotein'''
Line 132: Line 146:
**[[4h5l]], [[4csg]], [[5fva]] – TvRNP – Toscana virus<br />
**[[4h5l]], [[4csg]], [[5fva]] – TvRNP – Toscana virus<br />
**[[4csf]] – TvRNP + RNA<br />
**[[4csf]] – TvRNP + RNA<br />
 +
**[[8bpk]] – TvRNP + nanobody<br />
**[[4uft]] – MevRNP + RNA <br />
**[[4uft]] – MevRNP + RNA <br />

Revision as of 08:02, 16 August 2023

3D Structures of Nucleoprotein

Updated on 16-August-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky, Joel L. Sussman

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