2c9z

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Current revision (09:23, 9 May 2024) (edit) (undo)
 
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<StructureSection load='2c9z' size='340' side='right'caption='[[2c9z]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='2c9z' size='340' side='right'caption='[[2c9z]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2c9z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Grape Grape]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C9Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C9Z FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2c9z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vitis_vinifera Vitis vinifera]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C9Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C9Z FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=QUE:3,5,7,3,4-PENTAHYDROXYFLAVONE'>QUE</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2c1x|2c1x]], [[2c1z|2c1z]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=QUE:3,5,7,3,4-PENTAHYDROXYFLAVONE'>QUE</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Flavonol_3-O-glucosyltransferase Flavonol 3-O-glucosyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.91 2.4.1.91] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c9z OCA], [https://pdbe.org/2c9z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c9z RCSB], [https://www.ebi.ac.uk/pdbsum/2c9z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c9z ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c9z OCA], [https://pdbe.org/2c9z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c9z RCSB], [https://www.ebi.ac.uk/pdbsum/2c9z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c9z ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/UFOG_VITVI UFOG_VITVI]] In the presence of other necessary color factors, this glycosylation reaction allows the accumulation of anthocyanin pigments. Involved in the formation of red wine pigments. Can use UDP-Glc, UDP-5SGlc, UDP-Xyl, UDP-Man, UDP-Gal, UDP-GlcNAc, GDP-Glc, dTDP-Glc and dTDP-Xyl as sugar donor, but not UDP-6OMeGal, UDP-Ara, UDP-6FGal, UDP-GlcN, UDP-2FGal, UDP-5SAra, GDP-Man, GDPFuc, UDP-Fuc or UDP-Rha. Cyanidin is the natural acceptor, but quercitin and kaempferol can also be glucosylated.
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[https://www.uniprot.org/uniprot/UFOG_VITVI UFOG_VITVI] In the presence of other necessary color factors, this glycosylation reaction allows the accumulation of anthocyanin pigments. Involved in the formation of red wine pigments. Can use UDP-Glc, UDP-5SGlc, UDP-Xyl, UDP-Man, UDP-Gal, UDP-GlcNAc, GDP-Glc, dTDP-Glc and dTDP-Xyl as sugar donor, but not UDP-6OMeGal, UDP-Ara, UDP-6FGal, UDP-GlcN, UDP-2FGal, UDP-5SAra, GDP-Man, GDPFuc, UDP-Fuc or UDP-Rha. Cyanidin is the natural acceptor, but quercitin and kaempferol can also be glucosylated.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Flavonol 3-O-glucosyltransferase]]
 
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[[Category: Grape]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bowles, D J]]
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[[Category: Vitis vinifera]]
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[[Category: Davies, G J]]
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[[Category: Bowles DJ]]
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[[Category: Davis, B G]]
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[[Category: Davies GJ]]
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[[Category: Ford, C M]]
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[[Category: Davis BG]]
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[[Category: Kiat-Lim, E]]
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[[Category: Ford CM]]
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[[Category: Martinez-Fleites, C]]
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[[Category: Kiat-Lim E]]
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[[Category: Offen, W]]
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[[Category: Martinez-Fleites C]]
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[[Category: Tarling, C A]]
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[[Category: Offen W]]
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[[Category: Yang, M]]
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[[Category: Tarling CA]]
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[[Category: Catalysis]]
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[[Category: Yang M]]
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[[Category: Flavonoid]]
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[[Category: Glycosylation]]
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[[Category: Glycosyltransferase]]
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[[Category: Transferase]]
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[[Category: Wine]]
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Current revision

Structure and activity of a flavonoid 3-0 glucosyltransferase reveals the basis for plant natural product modification

PDB ID 2c9z

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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