Fel d 1

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Figure 1 shows the general structure of a Fel d 1 monomer, shown in two different orientations, rotated 90° around the vertical axis. Chains 1 and 2 correspond to the gold and blue helices respectively. The dotted line indicates the disordered loop (residues 75 to 92). The three disulfide bridges connecting chains 1 and 2 are shown in green. An arrow indicates the unique glycosylation site at residue N33<ref name="[1]"/>.
Figure 1 shows the general structure of a Fel d 1 monomer, shown in two different orientations, rotated 90° around the vertical axis. Chains 1 and 2 correspond to the gold and blue helices respectively. The dotted line indicates the disordered loop (residues 75 to 92). The three disulfide bridges connecting chains 1 and 2 are shown in green. An arrow indicates the unique glycosylation site at residue N33<ref name="[1]"/>.
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[[Image:Monomero.png | thumb | center | 400px | '''Figure 1.''' General structure of a Fel d 1 monomer, shown in two distinct orientations, rotated 90° about the vertical axis<ref name="[1]"/>.]]
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[[Image:Monomero.png | thumb | center | 500px | '''Figure 1.''' General structure of a Fel d 1 monomer, shown in two distinct orientations, rotated 90° about the vertical axis<ref name="[1]"/>.]]
In the Fel d 1 tetramer, three Ca<sup>2+</sup> binding sites were identified<ref name="[4]"/>, as in Figure 2, where the Ca<sup>2+</sup> are indicated as red balls. Two Ca<sup>2+</sup> binding sites are equivalent and are found symmetrically located on either side of the dimer and the third is found within the dimerization interface (Figure 2 (a) and (b)). The equivalent Ca<sup>2+</sup> binds to the carbonyl groups of residues Asp46 and Met49, as well as to four and three water molecules in the A and B subunits, respectively (Figure 2 (c)) and the Ca<sup>2+</sup> located at the dimerization interface binds to the OD1 atoms of residues Asn89 (in subunit A), Asn89 (B) and Asp130 (B), as well as to the carbonyl group of residue Ile125 (A) and three molecules of water (Figure 2 (d))<ref name="[2]">KAISER, Liselotte; VELICKOVIC, Tanja Cirkovic; BADIA-MARTINEZ, Daniel; ADEDOYIN, Justus; THUNBERG, Sarah; HALLÉN, Dan; BERNDT, Kurt; GRÖNLUND, Hans; GAFVELIN, Guro; HAGE, Marianne van; ACHOUR, Adnane. Structural Characterization of the Tetrameric form of the Major Cat Allergen Fel d 1. Journal of Molecular Biology, [s. l.], v. 370, ed. 4, p. 714-727, 2007. doi: https://doi.org/10.1016/j.jmb.2007.04.074.</ref>.
In the Fel d 1 tetramer, three Ca<sup>2+</sup> binding sites were identified<ref name="[4]"/>, as in Figure 2, where the Ca<sup>2+</sup> are indicated as red balls. Two Ca<sup>2+</sup> binding sites are equivalent and are found symmetrically located on either side of the dimer and the third is found within the dimerization interface (Figure 2 (a) and (b)). The equivalent Ca<sup>2+</sup> binds to the carbonyl groups of residues Asp46 and Met49, as well as to four and three water molecules in the A and B subunits, respectively (Figure 2 (c)) and the Ca<sup>2+</sup> located at the dimerization interface binds to the OD1 atoms of residues Asn89 (in subunit A), Asn89 (B) and Asp130 (B), as well as to the carbonyl group of residue Ile125 (A) and three molecules of water (Figure 2 (d))<ref name="[2]">KAISER, Liselotte; VELICKOVIC, Tanja Cirkovic; BADIA-MARTINEZ, Daniel; ADEDOYIN, Justus; THUNBERG, Sarah; HALLÉN, Dan; BERNDT, Kurt; GRÖNLUND, Hans; GAFVELIN, Guro; HAGE, Marianne van; ACHOUR, Adnane. Structural Characterization of the Tetrameric form of the Major Cat Allergen Fel d 1. Journal of Molecular Biology, [s. l.], v. 370, ed. 4, p. 714-727, 2007. doi: https://doi.org/10.1016/j.jmb.2007.04.074.</ref>.
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[[Image:Ca2.png | thumb | | center | 400px | '''Figure 2.''' General structure of the Fel d 1 tetramer. (a) Schematic view of the Fel d 1 tetramer. The two heterodimeric subunits A and B, each composed of the linked 1 and 2 chains, that form the tetramer are yellow and blue, respectively. The three Ca<sup>2+</sup> ions are indicated as red balls. (b) Schematic view of the Fel d 1 tetramer following an approximately 90° rotation about the horizontal axis. (c) Calcium binding sites 1 and 2. (d) Calcium binding site 3<ref name="[2]"/>.]]
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[[Image:Ca2.png | thumb | | center | 500px | '''Figure 2.''' General structure of the Fel d 1 tetramer. (a) Schematic view of the Fel d 1 tetramer. The two heterodimeric subunits A and B, each composed of the linked 1 and 2 chains, that form the tetramer are yellow and blue, respectively. The three Ca<sup>2+</sup> ions are indicated as red balls. (b) Schematic view of the Fel d 1 tetramer following an approximately 90° rotation about the horizontal axis. (c) Calcium binding sites 1 and 2. (d) Calcium binding site 3<ref name="[2]"/>.]]
Furthermore, the Fel d 1 quaternary structure reports two cavities in the A and B subunits of 350 and 730 Å<sup>3</sup>, respectively, where the difference in size between the two cavities is a direct result of the conformational change within the region corresponding to residues 121– 131. This size difference is related to the conformation of the residues Leu129 and Asp130, which point in opposite directions in the A and B subunits. Furthermore, the Ca<sup>2+</sup> from the dimerization interface does not interact with the side chain of the Asp130 from the A subunit, projecting itself, then into its cavity, while the Asp130 side chain of the B subunit interacts with Ca<sup>2+</sup>. Such cavities have 3 and 7 water molecules, respectively. All of this can be seen in Figure 3<ref name="[2]"/>.
Furthermore, the Fel d 1 quaternary structure reports two cavities in the A and B subunits of 350 and 730 Å<sup>3</sup>, respectively, where the difference in size between the two cavities is a direct result of the conformational change within the region corresponding to residues 121– 131. This size difference is related to the conformation of the residues Leu129 and Asp130, which point in opposite directions in the A and B subunits. Furthermore, the Ca<sup>2+</sup> from the dimerization interface does not interact with the side chain of the Asp130 from the A subunit, projecting itself, then into its cavity, while the Asp130 side chain of the B subunit interacts with Ca<sup>2+</sup>. Such cavities have 3 and 7 water molecules, respectively. All of this can be seen in Figure 3<ref name="[2]"/>.
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[[Image:Cavidades.jpg | thumb | | center | 400px | '''Figure 3.''' Shape of the cavities (in green) directly governed by the conformation of Leu129 and Asp130 residues. The Asp130 side chain (underlined) does not interact with Ca<sup>2+</sup> and projects into the cavity in the A subunit (in yellow), while the Asp130 side chain (B subunit) binds to Ca<sup>2+</sup>. The two external Ca<sup>2+</sup> ions are also indicated<ref name="[2]"/>.]]
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[[Image:Cavidades.jpg | thumb | center | 500px | '''Figure 3.''' Shape of the cavities (in green) directly governed by the conformation of Leu129 and Asp130 residues. The Asp130 side chain (underlined) does not interact with Ca<sup>2+</sup> and projects into the cavity in the A subunit (in yellow), while the Asp130 side chain (B subunit) binds to Ca<sup>2+</sup>. The two external Ca<sup>2+</sup> ions are also indicated<ref name="[2]"/>.]]
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Additionally, to add to the immunotherapy treatment, there is a cat food supplemented with anti-Fel d 1 IgY, which significantly reduces active Fel d 1 levels. Figure 4 shows the three-dimensional configuration of Fel d 1 (a) and the structure of Fel d 1 linked to two anti-Fel d 1 IgY antibodies (b) <ref name="[3]"/>.
Additionally, to add to the immunotherapy treatment, there is a cat food supplemented with anti-Fel d 1 IgY, which significantly reduces active Fel d 1 levels. Figure 4 shows the three-dimensional configuration of Fel d 1 (a) and the structure of Fel d 1 linked to two anti-Fel d 1 IgY antibodies (b) <ref name="[3]"/>.
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[[Image:Anticorpos.jpg | thumb | center | 400px | '''Figure 4.''' (a) Three-dimensional configuration of Fel d 1 (b) Fel d 1 linked to two anti-Fel d 1 IgY antibodies <ref name="[3]"/>.]]
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[[Image:Anticorpos.jpg | thumb | center | 500px | '''Figure 4.''' (a) Three-dimensional configuration of Fel d 1 (b) Fel d 1 linked to two anti-Fel d 1 IgY antibodies <ref name="[3]"/>.]]
== '''References''' ==
== '''References''' ==
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<references/>

Revision as of 21:32, 6 December 2021

1PUO - Fel d 1: The major cat allergen

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Henrique Barreto Gonçalves, Michal Harel, Jaime Prilusky

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