2ywh

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Current revision (09:08, 25 October 2023) (edit) (undo)
 
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<StructureSection load='2ywh' size='340' side='right'caption='[[2ywh]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
<StructureSection load='2ywh' size='340' side='right'caption='[[2ywh]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2ywh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWH FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2ywh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWH FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2ywe|2ywe]], [[2ywf|2ywf]], [[2ywg|2ywg]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aq_1725 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywh OCA], [https://pdbe.org/2ywh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywh RCSB], [https://www.ebi.ac.uk/pdbsum/2ywh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywh ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywh TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywh OCA], [https://pdbe.org/2ywh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywh RCSB], [https://www.ebi.ac.uk/pdbsum/2ywh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywh ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywh TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/LEPA_AQUAE LEPA_AQUAE]] Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (By similarity).
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[https://www.uniprot.org/uniprot/LEPA_AQUAE LEPA_AQUAE] Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aquae]]
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[[Category: Aquifex aeolicus VF5]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Hanawa-Suetsugu, K]]
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[[Category: Hanawa-Suetsugu K]]
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[[Category: Kaminishi, T]]
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[[Category: Kaminishi T]]
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[[Category: Kawazoe, M]]
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[[Category: Kawazoe M]]
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[[Category: Nakayama-Ushikoshi, R]]
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[[Category: Nakayama-Ushikoshi R]]
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[[Category: Nishino, A]]
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[[Category: Nishino A]]
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[[Category: Structural genomic]]
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[[Category: Shirouzu M]]
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[[Category: Shirouzu, M]]
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[[Category: Takemoto C]]
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[[Category: Takemoto, C]]
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[[Category: Terada T]]
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[[Category: Terada, T]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S]]
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[[Category: Beta-barrel]]
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[[Category: Ferredoxin-like domain]]
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[[Category: G domain]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Rsgi]]
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[[Category: Translation]]
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Current revision

Crystal structure of GDP-bound LepA from Aquifex aeolicus

PDB ID 2ywh

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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