2z6w
From Proteopedia
(Difference between revisions)
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<StructureSection load='2z6w' size='340' side='right'caption='[[2z6w]], [[Resolution|resolution]] 0.96Å' scene=''> | <StructureSection load='2z6w' size='340' side='right'caption='[[2z6w]], [[Resolution|resolution]] 0.96Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2z6w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2z6w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Tolypocladium_inflatum Tolypocladium inflatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z6W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z6W FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.96Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ABA:ALPHA-AMINOBUTYRIC+ACID'>ABA</scene>, <scene name='pdbligand=BMT:4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE'>BMT</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=MLE:N-METHYLLEUCINE'>MLE</scene>, <scene name='pdbligand=MVA:N-METHYLVALINE'>MVA</scene>, <scene name='pdbligand=SAR:SARCOSINE'>SAR</scene></td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z6w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z6w OCA], [https://pdbe.org/2z6w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z6w RCSB], [https://www.ebi.ac.uk/pdbsum/2z6w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z6w ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z6w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z6w OCA], [https://pdbe.org/2z6w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z6w RCSB], [https://www.ebi.ac.uk/pdbsum/2z6w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z6w ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/PPIF_HUMAN PPIF_HUMAN] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Involved in regulation of the mitochondrial permeability transition pore (mPTP). It is proposed that its association with the mPTP is masking a binding site for inhibiting inorganic phosphate (Pi) and promotes the open probablity of the mPTP leading to apoptosis or necrosis; the requirement of the PPIase activity for this function is debated. In cooperation with mitochondrial TP53 is involved in activating oxidative stress-induced necrosis. Involved in modulation of mitochondrial membrane F(1)F(0) ATP synthase activity and regulation of mitochondrial matrix adenine nucleotide levels. Has anti-apoptotic activity independently of mPTP and in cooperation with BCL2 inhibits cytochrome c-dependent apoptosis.<ref>PMID:19228691</ref> <ref>PMID:22726440</ref> | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Tolypocladium inflatum]] |
- | [[Category: Fujihashi | + | [[Category: Fujihashi M]] |
- | [[Category: Kajitani | + | [[Category: Kajitani K]] |
- | [[Category: Kobayashi | + | [[Category: Kobayashi Y]] |
- | [[Category: Miki | + | [[Category: Miki K]] |
- | [[Category: Shimizu | + | [[Category: Shimizu S]] |
- | [[Category: Tsujimoto | + | [[Category: Tsujimoto Y]] |
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Current revision
Crystal structure of human cyclophilin D in complex with cyclosporin A
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