Fel d 1

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In the Fel d 1 tetramer, three Ca<sup>2+</sup> binding sites were identified<ref name="[4]"/>, as in Figure 2, where the Ca<sup>2+</sup> are indicated as red balls. Two Ca<sup>2+</sup> binding sites are equivalent and are found symmetrically located on either side of the dimer and the third is found within the dimerization interface (Figure 2 (a) and (b)). The Ca<sup>2+</sup> equivalents bind to the carbonyl groups of Asp46 and Met49 residues, as well as to four and three water molecules in the A and B subunits, respectively, (Figure 2 (c)) and the Ca<sup>2+</sup> located at the dimerization interface binds to the [https://www.ebi.ac.uk/pdbe-srv/pdbechem/atom/show?cid=IAS&name=OD1 OD1] atoms of residues Asn89 (in subunit A), Asn89 (B) and Asp130 (B), as well as to the carbonyl group of residue Ile125 (A) and three molecules of water (Figure 2 (d))<ref name="[2]">KAISER, Liselotte; VELICKOVIC, Tanja Cirkovic; BADIA-MARTINEZ, Daniel; ADEDOYIN, Justus; THUNBERG, Sarah; HALLÉN, Dan; BERNDT, Kurt; GRÖNLUND, Hans; GAFVELIN, Guro; HAGE, Marianne van; ACHOUR, Adnane. Structural Characterization of the Tetrameric form of the Major Cat Allergen Fel d 1. Journal of Molecular Biology, [s. l.], v. 370, ed. 4, p. 714-727, 2007. doi: https://doi.org/10.1016/j.jmb.2007.04.074.</ref>.
In the Fel d 1 tetramer, three Ca<sup>2+</sup> binding sites were identified<ref name="[4]"/>, as in Figure 2, where the Ca<sup>2+</sup> are indicated as red balls. Two Ca<sup>2+</sup> binding sites are equivalent and are found symmetrically located on either side of the dimer and the third is found within the dimerization interface (Figure 2 (a) and (b)). The Ca<sup>2+</sup> equivalents bind to the carbonyl groups of Asp46 and Met49 residues, as well as to four and three water molecules in the A and B subunits, respectively, (Figure 2 (c)) and the Ca<sup>2+</sup> located at the dimerization interface binds to the [https://www.ebi.ac.uk/pdbe-srv/pdbechem/atom/show?cid=IAS&name=OD1 OD1] atoms of residues Asn89 (in subunit A), Asn89 (B) and Asp130 (B), as well as to the carbonyl group of residue Ile125 (A) and three molecules of water (Figure 2 (d))<ref name="[2]">KAISER, Liselotte; VELICKOVIC, Tanja Cirkovic; BADIA-MARTINEZ, Daniel; ADEDOYIN, Justus; THUNBERG, Sarah; HALLÉN, Dan; BERNDT, Kurt; GRÖNLUND, Hans; GAFVELIN, Guro; HAGE, Marianne van; ACHOUR, Adnane. Structural Characterization of the Tetrameric form of the Major Cat Allergen Fel d 1. Journal of Molecular Biology, [s. l.], v. 370, ed. 4, p. 714-727, 2007. doi: https://doi.org/10.1016/j.jmb.2007.04.074.</ref>.
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[[Image:Ca2.png | thumb | | center | 500px | '''Figure 2.''' General structure of the Fel d 1 tetramer. (a) Schematic view of the Fel d 1 tetramer. The two heterodimeric subunits A and B, each composed of the linked 1 and 2 chains, that form the tetramer are yellow and blue, respectively. The three Ca<sup>2+</sup> ions are indicated as red balls. (b) Schematic view of the Fel d 1 tetramer following an approximately 90° rotation about the horizontal axis. (c) Calcium binding sites 1 and 2. (d) Calcium binding site 3<ref name="[2]"/>.]]
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[[Image:Cálcios print.png | thumb | center | 500px | '''Figure 2.''' General structure of the Fel d 1 tetramer. (a) Schematic view of the Fel d 1 tetramer. The two heterodimeric subunits A and B, each composed of the linked 1 and 2 chains, that form the tetramer are yellow and blue, respectively. The three Ca<sup>2+</sup> ions are indicated as red balls. (b) Schematic view of the Fel d 1 tetramer following an approximately 90° rotation about the horizontal axis. (c) Calcium binding sites 1 and 2. (d) Calcium binding site 3<ref name="[2]"/>.]]

Revision as of 18:26, 8 December 2021

Fel d 1: The major cat allergen

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Henrique Barreto Gonçalves, Michal Harel, Jaime Prilusky

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