We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

7oyv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='7oyv' size='340' side='right'caption='[[7oyv]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='7oyv' size='340' side='right'caption='[[7oyv]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7oyv]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OYV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OYV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7oyv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OYV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OYV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3IE:(2~{S})-1-methoxypropan-2-amine'>3IE</scene>, <scene name='pdbligand=3IZ:(2~{R})-1-[(2~{R})-1-[(2~{R})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-yl]oxypropan-2-amine'>3IZ</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=JFN:(2R)-1-methoxypropan-2-amine'>JFN</scene>, <scene name='pdbligand=SPD:SPERMIDINE'>SPD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3IE:(2~{S})-1-methoxypropan-2-amine'>3IE</scene>, <scene name='pdbligand=3IZ:(2~{R})-1-[(2~{R})-1-[(2~{R})-1-(2-methoxyethoxy)propan-2-yl]oxypropan-2-yl]oxypropan-2-amine'>3IZ</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=JFN:(2R)-1-methoxypropan-2-amine'>JFN</scene>, <scene name='pdbligand=SPD:SPERMIDINE'>SPD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oyv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oyv OCA], [https://pdbe.org/7oyv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oyv RCSB], [https://www.ebi.ac.uk/pdbsum/7oyv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oyv ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oyv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oyv OCA], [https://pdbe.org/7oyv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oyv RCSB], [https://www.ebi.ac.uk/pdbsum/7oyv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oyv ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/A0A6S5NLK9_ECOLX A0A6S5NLK9_ECOLX]] Required for the activity of the bacterial periplasmic transport system of putrescine.[PIRNR:PIRNR019574]
+
[https://www.uniprot.org/uniprot/POTF_ECOLI POTF_ECOLI] Required for the activity of the bacterial periplasmic transport system of putrescine. Polyamine binding protein.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Hocker, B]]
+
[[Category: Hocker B]]
-
[[Category: Kroeger, P]]
+
[[Category: Kroeger P]]
-
[[Category: Shanmugaratnam, S]]
+
[[Category: Shanmugaratnam S]]
-
[[Category: E coli]]
+
-
[[Category: Periplasmic binding protein]]
+
-
[[Category: Potf]]
+
-
[[Category: Spermidine]]
+
-
[[Category: Transport protein]]
+

Revision as of 12:58, 1 February 2024

E.coli's putrescine receptor variant PotF/D (4JDF) with mutations E39D F88A S247D in complex with spermidine

PDB ID 7oyv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools