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3ahg

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Current revision (14:26, 1 November 2023) (edit) (undo)
 
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<StructureSection load='3ahg' size='340' side='right'caption='[[3ahg]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3ahg' size='340' side='right'caption='[[3ahg]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3ahg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bifidobacterium_parvulorum"_reuter_1963 "bifidobacterium parvulorum" reuter 1963]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AHG FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3ahg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bifidobacterium_breve Bifidobacterium breve]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AHG FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HTD:2-[(9AR)-2,7-DIMETHYL-9A,10-DIHYDRO-5H-PYRIMIDO[4,5-D][1,3]THIAZOLO[3,2-A]PYRIMIDIN-8-YL]ETHYL+TRIHYDROGEN+DIPHOSPHATE'>HTD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ahc|3ahc]], [[3ahd|3ahd]], [[3ahe|3ahe]], [[3ahf|3ahf]], [[3ahh|3ahh]], [[3ahi|3ahi]], [[3ahj|3ahj]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HTD:2-[(9AR)-2,7-DIMETHYL-9A,10-DIHYDRO-5H-PYRIMIDO[4,5-D][1,3]THIAZOLO[3,2-A]PYRIMIDIN-8-YL]ETHYL+TRIHYDROGEN+DIPHOSPHATE'>HTD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xfp ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1685 "Bifidobacterium parvulorum" Reuter 1963])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Fructose-6-phosphate_phosphoketolase Fructose-6-phosphate phosphoketolase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.22 4.1.2.22] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ahg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahg OCA], [https://pdbe.org/3ahg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ahg RCSB], [https://www.ebi.ac.uk/pdbsum/3ahg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahg ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ahg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahg OCA], [https://pdbe.org/3ahg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ahg RCSB], [https://www.ebi.ac.uk/pdbsum/3ahg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahg ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D6PAH1_BIFBR D6PAH1_BIFBR]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bifidobacterium parvulorum reuter 1963]]
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[[Category: Bifidobacterium breve]]
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[[Category: Fructose-6-phosphate phosphoketolase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Ashida, H]]
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[[Category: Ashida H]]
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[[Category: Fushinobu, S]]
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[[Category: Fushinobu S]]
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[[Category: Katayama, T]]
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[[Category: Katayama T]]
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[[Category: Kim, B J]]
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[[Category: Kim B-J]]
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[[Category: Shoun, H]]
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[[Category: Shoun H]]
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[[Category: Suzuki, R]]
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[[Category: Suzuki R]]
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[[Category: Wakagi, T]]
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[[Category: Wakagi T]]
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[[Category: Yamamoto, K]]
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[[Category: Yamamoto K]]
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[[Category: Alpha-beta fold]]
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[[Category: Dihydrothiachromine form of thiamine diphosphate]]
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[[Category: Homodimer]]
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[[Category: Lyase]]
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[[Category: Thiamine diphosphate-dependent enzyme]]
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Current revision

H64A mutant of Phosphoketolase from Bifidobacterium Breve complexed with a tricyclic ring form of thiamine diphosphate

PDB ID 3ahg

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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