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3b2d

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Current revision (08:52, 11 October 2023) (edit) (undo)
 
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<StructureSection load='3b2d' size='340' side='right'caption='[[3b2d]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='3b2d' size='340' side='right'caption='[[3b2d]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3b2d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B2D FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3b2d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B2D FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD180, LY64, RP105 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), LY86, MD1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b2d OCA], [https://pdbe.org/3b2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b2d RCSB], [https://www.ebi.ac.uk/pdbsum/3b2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b2d ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b2d OCA], [https://pdbe.org/3b2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b2d RCSB], [https://www.ebi.ac.uk/pdbsum/3b2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b2d ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/CD180_HUMAN CD180_HUMAN]] May cooperate with MD-1 and TLR4 to mediate the innate immune response to bacterial lipopolysaccharide (LPS) in B-cells. Leads to NF-kappa-B activation. Also involved in the life/death decision of B-cells (By similarity). [[https://www.uniprot.org/uniprot/LY86_HUMAN LY86_HUMAN]] May cooperate with CD180 and TLR4 to mediate the innate immune response to bacterial lipopolysaccharide (LPS) and cytokine production. Important for efficient CD180 cell surface expression (By similarity).
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[https://www.uniprot.org/uniprot/CD180_HUMAN CD180_HUMAN] May cooperate with MD-1 and TLR4 to mediate the innate immune response to bacterial lipopolysaccharide (LPS) in B-cells. Leads to NF-kappa-B activation. Also involved in the life/death decision of B-cells (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Ohto, U]]
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[[Category: Ohto U]]
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[[Category: Shimizu, T]]
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[[Category: Shimizu T]]
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[[Category: Glycosylation]]
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[[Category: Immune system]]
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[[Category: Leucine rich repeat md-2 related lipid recognition]]
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[[Category: Protein-protein complex]]
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[[Category: Receptor innate immunity]]
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Current revision

Crystal structure of human RP105/MD-1 complex

PDB ID 3b2d

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