2i04

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Current revision (08:10, 30 October 2024) (edit) (undo)
 
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<StructureSection load='2i04' size='340' side='right'caption='[[2i04]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
<StructureSection load='2i04' size='340' side='right'caption='[[2i04]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2i04]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I04 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I04 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2i04]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_papillomavirus_type_18 Human papillomavirus type 18] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I04 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I04 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i04 OCA], [https://pdbe.org/2i04 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i04 RCSB], [https://www.ebi.ac.uk/pdbsum/2i04 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i04 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i04 OCA], [https://pdbe.org/2i04 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i04 RCSB], [https://www.ebi.ac.uk/pdbsum/2i04 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i04 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/MAGI1_MOUSE MAGI1_MOUSE]] May play a role as scaffolding protein at cell-cell junctions. May regulate acid-induced ASIC3 currents by modulating its expression at the cell surface.<ref>PMID:15317815</ref> [[https://www.uniprot.org/uniprot/VE6_HPV18 VE6_HPV18]] Transcriptional transactivator. Binds double stranded DNA (By similarity). Has transforming activity. Inactivates, with E6-AP ubiquitin-protein ligase, the human p53/TP53 tumor suppressor protein by targeting it to degradation. Binds and targets human MUPP1/MPDZ protein to degradation. Those two functions presumably contribute to transforming activity. Interaction with human FBLN1 protein also seems to be linked to cell transformation.
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[https://www.uniprot.org/uniprot/MAGI1_MOUSE MAGI1_MOUSE] May play a role as scaffolding protein at cell-cell junctions. May regulate acid-induced ASIC3 currents by modulating its expression at the cell surface.<ref>PMID:15317815</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i0/2i04_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i0/2i04_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human papillomavirus type 18]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Banks, L]]
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[[Category: Banks L]]
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[[Category: Chen, X S]]
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[[Category: Chen XS]]
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[[Category: Dasgupta, J]]
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[[Category: Dasgupta J]]
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[[Category: Thomas, M]]
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[[Category: Thomas M]]
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[[Category: Zhang, Y]]
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[[Category: Zhang Y]]
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[[Category: E6 binding]]
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[[Category: Pdz]]
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[[Category: Peptide binding protein]]
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[[Category: Tumor suppressor]]
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Current revision

X-ray crystal structure of MAGI-1 PDZ1 bound to the C-terminal peptide of HPV18 E6

PDB ID 2i04

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