This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3bpx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:12, 30 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3bpx' size='340' side='right'caption='[[3bpx]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='3bpx' size='340' side='right'caption='[[3bpx]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3bpx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanobacterium_thermoautotrophicum Methanobacterium thermoautotrophicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BPX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BPX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3bpx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_marburgensis_str._Marburg Methanothermobacter marburgensis str. Marburg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BPX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BPX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAL:2-HYDROXYBENZOIC+ACID'>SAL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3bpv|3bpv]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAL:2-HYDROXYBENZOIC+ACID'>SAL</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MT313 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=145262 Methanobacterium thermoautotrophicum])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bpx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bpx OCA], [https://pdbe.org/3bpx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bpx RCSB], [https://www.ebi.ac.uk/pdbsum/3bpx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bpx ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bpx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bpx OCA], [https://pdbe.org/3bpx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bpx RCSB], [https://www.ebi.ac.uk/pdbsum/3bpx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bpx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O26413_METTH O26413_METTH]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 33: Line 34:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Methanobacterium thermoautotrophicum]]
+
[[Category: Methanothermobacter marburgensis str. Marburg]]
-
[[Category: Christendat, D]]
+
[[Category: Christendat D]]
-
[[Category: Saridakis, V]]
+
[[Category: Saridakis V]]
-
[[Category: Shahinas, D]]
+
[[Category: Shahinas D]]
-
[[Category: Xu, X]]
+
[[Category: Xu X]]
-
[[Category: Dna binding]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Marr]]
+
-
[[Category: Transcription factor]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transcription regulator]]
+
-
[[Category: Winged helix motif]]
+

Current revision

Crystal Structure of MarR

PDB ID 3bpx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools