This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3clh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:58, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3clh' size='340' side='right'caption='[[3clh]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='3clh' size='340' side='right'caption='[[3clh]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3clh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43504 Atcc 43504]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3clh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aroB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 ATCC 43504])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-dehydroquinate_synthase 3-dehydroquinate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.4 4.2.3.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clh OCA], [https://pdbe.org/3clh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clh RCSB], [https://www.ebi.ac.uk/pdbsum/3clh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clh ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clh OCA], [https://pdbe.org/3clh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clh RCSB], [https://www.ebi.ac.uk/pdbsum/3clh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clh ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AROB_HELPY AROB_HELPY]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 32: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 3-dehydroquinate synthase]]
+
[[Category: Helicobacter pylori]]
-
[[Category: Atcc 43504]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Chen, Y C]]
+
[[Category: Chen YC]]
-
[[Category: Cheng, W C]]
+
[[Category: Cheng WC]]
-
[[Category: Liu, J S]]
+
[[Category: Liu JS]]
-
[[Category: Wang, H J]]
+
[[Category: Wang HJ]]
-
[[Category: Wang, W C]]
+
[[Category: Wang WC]]
-
[[Category: Amino-acid biosynthesis]]
+
-
[[Category: Aromatic amino acid biosynthesis]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Dhq]]
+
-
[[Category: Lyase]]
+
-
[[Category: Nad]]
+
-
[[Category: Shikimate pathway]]
+

Current revision

Crystal structure of 3-dehydroquinate synthase (DHQS)from Helicobacter pylori

PDB ID 3clh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools