This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cnl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:04, 13 March 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3cnl' size='340' side='right'caption='[[3cnl]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3cnl' size='340' side='right'caption='[[3cnl]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3cnl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CNL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CNL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3cnl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CNL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CNL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3cnn|3cnn]], [[3cno|3cno]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM_0768 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cnl OCA], [https://pdbe.org/3cnl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cnl RCSB], [https://www.ebi.ac.uk/pdbsum/3cnl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cnl ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cnl OCA], [https://pdbe.org/3cnl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cnl RCSB], [https://www.ebi.ac.uk/pdbsum/3cnl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cnl ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/RBGA_THEMA RBGA_THEMA]] Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity. Binds to the 23S rRNA (By similarity).[UniProtKB:O31743]
+
[https://www.uniprot.org/uniprot/RBGA_THEMA RBGA_THEMA] Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity. Binds to the 23S rRNA (By similarity).[UniProtKB:O31743]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 23: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 43589]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Jang, J Y]]
+
[[Category: Thermotoga maritima]]
-
[[Category: Kim, D J]]
+
[[Category: Jang JY]]
-
[[Category: Suh, S W]]
+
[[Category: Kim DJ]]
-
[[Category: Yoon, H J]]
+
[[Category: Suh SW]]
-
[[Category: Circular permutation]]
+
[[Category: Yoon H-J]]
-
[[Category: Gnp]]
+
-
[[Category: Signaling protein]]
+
-
[[Category: Ylqf]]
+

Current revision

Crystal structure of GNP-bound YlqF from T. maritima

PDB ID 3cnl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools