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7dyu
From Proteopedia
(Difference between revisions)
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==Human JMJD5 in complex with MN and 5-((4-phenylbutyl)amino)pyridine-2,4-dicarboxylic acid.== | ==Human JMJD5 in complex with MN and 5-((4-phenylbutyl)amino)pyridine-2,4-dicarboxylic acid.== | ||
| - | <StructureSection load='7dyu' size='340' side='right'caption='[[7dyu]]' scene=''> | + | <StructureSection load='7dyu' size='340' side='right'caption='[[7dyu]], [[Resolution|resolution]] 1.72Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DYU FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7dyu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DYU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DYU FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dyu OCA], [https://pdbe.org/7dyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dyu RCSB], [https://www.ebi.ac.uk/pdbsum/7dyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dyu ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HR9:5-(4-phenylbutylamino)pyridine-2,4-dicarboxylic+acid'>HR9</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dyu OCA], [https://pdbe.org/7dyu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dyu RCSB], [https://www.ebi.ac.uk/pdbsum/7dyu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dyu ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/KDM8_HUMAN KDM8_HUMAN] Histone demethylase required for G2/M phase cell cycle progression. Specifically demethylates dimethylated 'Lys-36' (H3K36me2) of histone H3, an epigenetic repressive mark, thereby acting as a transcription activator. Regulates expression of CCNA1 (cyclin-A1), leading to regulate cancer cell proliferation. | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Brewitz L]] | [[Category: Brewitz L]] | ||
[[Category: Nakashima Y]] | [[Category: Nakashima Y]] | ||
[[Category: Schofield CJ]] | [[Category: Schofield CJ]] | ||
Current revision
Human JMJD5 in complex with MN and 5-((4-phenylbutyl)amino)pyridine-2,4-dicarboxylic acid.
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