3dwp
From Proteopedia
(Difference between revisions)
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<StructureSection load='3dwp' size='340' side='right'caption='[[3dwp]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='3dwp' size='340' side='right'caption='[[3dwp]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3dwp]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3dwp]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DWP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DWP FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NGC:3,5-DIDEOXY-5-[(HYDROXYACETYL)AMINO]-D-GLYCERO-ALPHA-D-GALACTO-NON-2-ULOPYRANOSONIC+ACID'>NGC</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=NGC:3,5-DIDEOXY-5-[(HYDROXYACETYL)AMINO]-D-GLYCERO-ALPHA-D-GALACTO-NON-2-ULOPYRANOSONIC+ACID'>NGC</scene></td></tr> | |
- | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dwp OCA], [https://pdbe.org/3dwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dwp RCSB], [https://www.ebi.ac.uk/pdbsum/3dwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dwp ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dwp OCA], [https://pdbe.org/3dwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dwp RCSB], [https://www.ebi.ac.uk/pdbsum/3dwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dwp ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q3ZTX8_ECOLX Q3ZTX8_ECOLX] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dw/3dwp_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dw/3dwp_consurf.spt"</scriptWhenChecked> | ||
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Escherichia coli]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Beddoe | + | [[Category: Beddoe T]] |
- | [[Category: Byres | + | [[Category: Byres E]] |
- | [[Category: Chen | + | [[Category: Chen X]] |
- | [[Category: Chong | + | [[Category: Chong DC]] |
- | [[Category: Huang | + | [[Category: Huang S]] |
- | [[Category: Lofling | + | [[Category: Lofling JC]] |
- | [[Category: Paton | + | [[Category: Paton AW]] |
- | [[Category: Paton | + | [[Category: Paton JC]] |
- | [[Category: Rossjohn | + | [[Category: Rossjohn J]] |
- | [[Category: Smith | + | [[Category: Smith DF]] |
- | [[Category: Talbot | + | [[Category: Talbot UM]] |
- | [[Category: Varki | + | [[Category: Varki A]] |
- | [[Category: Varki | + | [[Category: Varki NM]] |
- | [[Category: Wilce | + | [[Category: Wilce MCJ]] |
- | [[Category: Yu | + | [[Category: Yu H]] |
- | + |
Current revision
Crystal structure of the B-subunit of the AB5 toxin from E. Coli with Neu5Gc
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Categories: Escherichia coli | Large Structures | Beddoe T | Byres E | Chen X | Chong DC | Huang S | Lofling JC | Paton AW | Paton JC | Rossjohn J | Smith DF | Talbot UM | Varki A | Varki NM | Wilce MCJ | Yu H