This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3dxz
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='3dxz' size='340' side='right'caption='[[3dxz]], [[Resolution|resolution]] 1.58Å' scene=''> | <StructureSection load='3dxz' size='340' side='right'caption='[[3dxz]], [[Resolution|resolution]] 1.58Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dxz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3dxz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DXZ FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.58Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | + | ||
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dxz OCA], [https://pdbe.org/3dxz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dxz RCSB], [https://www.ebi.ac.uk/pdbsum/3dxz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dxz ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dxz OCA], [https://pdbe.org/3dxz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dxz RCSB], [https://www.ebi.ac.uk/pdbsum/3dxz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dxz ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/TRMB_ECOLI TRMB_ECOLI] Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 27: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Escherichia coli K-12]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Gao | + | [[Category: Gao YX]] |
| - | [[Category: Liu | + | [[Category: Liu Q]] |
| - | [[Category: Niu | + | [[Category: Niu LW]] |
| - | [[Category: Teng | + | [[Category: Teng MK]] |
| - | [[Category: Zhou | + | [[Category: Zhou HH]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of EcTrmB in complex with SAH
| |||||||||||
Categories: Escherichia coli K-12 | Large Structures | Gao YX | Liu Q | Niu LW | Teng MK | Zhou HH
