This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7o8n
From Proteopedia
| Line 3: | Line 3: | ||
<StructureSection load='7o8n' size='340' side='right'caption='[[7o8n]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='7o8n' size='340' side='right'caption='[[7o8n]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[7o8n]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7O8N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7O8N FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7o8n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nonlabens_marinus_S1-08 Nonlabens marinus S1-08]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7O8N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7O8N FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OLA:OLEIC+ACID'>OLA</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OLA:OLEIC+ACID'>OLA</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7o8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7o8n OCA], [https://pdbe.org/7o8n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7o8n RCSB], [https://www.ebi.ac.uk/pdbsum/7o8n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7o8n ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7o8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7o8n OCA], [https://pdbe.org/7o8n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7o8n RCSB], [https://www.ebi.ac.uk/pdbsum/7o8n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7o8n ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/W8VZW3_9FLAO W8VZW3_9FLAO] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 16: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 7o8n" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 7o8n" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Rhodopsin 3D structures|Rhodopsin 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
| Line 21: | Line 27: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Bruenle | + | [[Category: Nonlabens marinus S1-08]] |
| - | [[Category: Casadei | + | [[Category: Bruenle S]] |
| - | [[Category: Cirelli | + | [[Category: Casadei C]] |
| - | [[Category: Dworkowski | + | [[Category: Cirelli C]] |
| - | [[Category: Ehrenberg | + | [[Category: Dworkowski F]] |
| - | [[Category: Furrer | + | [[Category: Ehrenberg D]] |
| - | [[Category: Gashi | + | [[Category: Furrer A]] |
| - | [[Category: Gotthard | + | [[Category: Gashi D]] |
| - | [[Category: Heberle | + | [[Category: Gotthard G]] |
| - | [[Category: James | + | [[Category: Heberle J]] |
| - | [[Category: Johnson | + | [[Category: James D]] |
| - | [[Category: Kekilli | + | [[Category: Johnson P]] |
| - | [[Category: Knopp | + | [[Category: Kekilli D]] |
| - | [[Category: Ma | + | [[Category: Knopp G]] |
| - | [[Category: Martiel | + | [[Category: Ma P]] |
| - | [[Category: Milne | + | [[Category: Martiel I]] |
| - | [[Category: Mous | + | [[Category: Milne C]] |
| - | [[Category: Nass | + | [[Category: Mous S]] |
| - | [[Category: Nogly | + | [[Category: Nass K]] |
| - | [[Category: Ozerov | + | [[Category: Nogly P]] |
| - | [[Category: Panepucci | + | [[Category: Ozerov D]] |
| - | [[Category: Panneels | + | [[Category: Panepucci E]] |
| - | [[Category: Schapiro | + | [[Category: Panneels V]] |
| - | [[Category: Schertler | + | [[Category: Schapiro I]] |
| - | [[Category: Sen | + | [[Category: Schertler G]] |
| - | [[Category: Skopintsev | + | [[Category: Sen S]] |
| - | [[Category: Standfuss | + | [[Category: Skopintsev P]] |
| - | [[Category: Wang | + | [[Category: Standfuss J]] |
| - | [[Category: Weinert | + | [[Category: Wang M]] |
| - | [[Category: Wranik | + | [[Category: Weinert T]] |
| - | + | [[Category: Wranik M]] | |
| - | + | ||
| - | + | ||
Current revision
NmHR light state structure at 7.5 ms (5 - 10 ms) after photoexcitation determined by serial millisecond crystallography
| |||||||||||
Categories: Large Structures | Nonlabens marinus S1-08 | Bruenle S | Casadei C | Cirelli C | Dworkowski F | Ehrenberg D | Furrer A | Gashi D | Gotthard G | Heberle J | James D | Johnson P | Kekilli D | Knopp G | Ma P | Martiel I | Milne C | Mous S | Nass K | Nogly P | Ozerov D | Panepucci E | Panneels V | Schapiro I | Schertler G | Sen S | Skopintsev P | Standfuss J | Wang M | Weinert T | Wranik M
