1lm0

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==Solution structure and characterization of the heme chaperone CcmE==
==Solution structure and characterization of the heme chaperone CcmE==
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<StructureSection load='1lm0' size='340' side='right'caption='[[1lm0]], [[NMR_Ensembles_of_Models | 35 NMR models]]' scene=''>
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<StructureSection load='1lm0' size='340' side='right'caption='[[1lm0]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1lm0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"pseudomonas_putrefaciens"_(derby_and_hammer)_long_and_hammer_1941 "pseudomonas putrefaciens" (derby and hammer) long and hammer 1941]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LM0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LM0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1lm0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_putrefaciens Shewanella putrefaciens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LM0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LM0 FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1j6q|1j6q]]</div></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ccmE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=24 "Pseudomonas putrefaciens" (Derby and Hammer) Long and Hammer 1941])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lm0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lm0 OCA], [https://pdbe.org/1lm0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lm0 RCSB], [https://www.ebi.ac.uk/pdbsum/1lm0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lm0 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lm0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lm0 OCA], [https://pdbe.org/1lm0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lm0 RCSB], [https://www.ebi.ac.uk/pdbsum/1lm0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lm0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/CCME_SHEON CCME_SHEON]] Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (By similarity).
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[https://www.uniprot.org/uniprot/CCME_SHEON CCME_SHEON] Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lm0 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lm0 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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The covalent attachment of the heme cofactor in c-type cytochromes is a surprisingly complex process, which in bacteria involves a number of different proteins. Among the latter, the ccmE gene product is known to perform a key role in the heme delivery pathway in Gram-negative bacteria. The solution structure of the soluble domain of apo-CcmE from Shewanella putrefaciens was determined through NMR spectroscopy on a 13C,15N-labeled sample. The structure is characterized by a compact core with large regions of beta structure, while the N-terminal and C-terminal regions are essentially unstructured. The overall folding is similar to that of the so-called oligo-binding proteins (OB fold). Solvent-exposed aromatic residues, conserved in all CcmE homologues, have been found in the proximity of His131, the putative heme-binding residue, that could have a role in the interaction with heme. No interaction between CcmE and heme, as well as between CcmE and holocytochrome c, could be detected in vitro by electronic spectroscopy or by NMR. The data available suggest that the heme transfer process is likely to involve a heterooligomeric protein complex and occur under a tight enzymatic control.
 
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Solution structure and characterization of the heme chaperone CcmE.,Arnesano F, Banci L, Barker PD, Bertini I, Rosato A, Su XC, Viezzoli MS Biochemistry. 2002 Nov 19;41(46):13587-94. PMID:12427019<ref>PMID:12427019</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 1lm0" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Arnesano, F]]
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[[Category: Shewanella putrefaciens]]
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[[Category: Banci, L]]
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[[Category: Arnesano F]]
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[[Category: Barker, P D]]
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[[Category: Banci L]]
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[[Category: Bertini, I]]
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[[Category: Barker PD]]
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[[Category: Rosato, A]]
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[[Category: Bertini I]]
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[[Category: Su, X C]]
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[[Category: Rosato A]]
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[[Category: Viezzoli, M S]]
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[[Category: Su XC]]
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[[Category: All-beta protein]]
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[[Category: Viezzoli MS]]
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[[Category: Chaperone]]
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[[Category: Cytochrome c maturation]]
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[[Category: Heme delivery]]
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Revision as of 08:24, 10 April 2024

Solution structure and characterization of the heme chaperone CcmE

PDB ID 1lm0

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