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| | ==Solution structure of Grx4, a monothiol glutaredoxin from E. coli.== | | ==Solution structure of Grx4, a monothiol glutaredoxin from E. coli.== |
| - | <StructureSection load='1yka' size='340' side='right'caption='[[1yka]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='1yka' size='340' side='right'caption='[[1yka]]' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[1yka]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YKA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YKA FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1yka]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YKA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YKA FirstGlance]. <br> |
| - | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ydhd ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yka OCA], [https://pdbe.org/1yka PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yka RCSB], [https://www.ebi.ac.uk/pdbsum/1yka PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yka ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yka OCA], [https://pdbe.org/1yka PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yka RCSB], [https://www.ebi.ac.uk/pdbsum/1yka PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yka ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[https://www.uniprot.org/uniprot/GLRX4_ECOLI GLRX4_ECOLI]] Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters (Probable).
| + | [https://www.uniprot.org/uniprot/GLRX4_ECOLI GLRX4_ECOLI] Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters (Probable). |
| | == Evolutionary Conservation == | | == Evolutionary Conservation == |
| | [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Bacillus coli migula 1895]] | + | [[Category: Escherichia coli]] |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Andresen, C]] | + | [[Category: Andresen C]] |
| - | [[Category: Bellanda, M]] | + | [[Category: Bellanda M]] |
| - | [[Category: Fernandes, A P]] | + | [[Category: Fernandes AP]] |
| - | [[Category: Fladvad, M]] | + | [[Category: Fladvad M]] |
| - | [[Category: Holmgren, A]] | + | [[Category: Holmgren A]] |
| - | [[Category: Mammi, S]] | + | [[Category: Mammi S]] |
| - | [[Category: Sunnerhagen, M]] | + | [[Category: Sunnerhagen M]] |
| - | [[Category: Vlamis-Gardikas, A]] | + | [[Category: Vlamis-Gardikas A]] |
| - | [[Category: Electron transport]]
| + | |
| - | [[Category: Mixed alpha/beta fold]]
| + | |
| - | [[Category: Thioredoxin fold]]
| + | |
| Structural highlights
Function
GLRX4_ECOLI Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters (Probable).
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
The ubiquitous glutaredoxin protein family is present in both prokaryotes and eukaryotes, and is closely related to the thioredoxins, which reduce their substrates using a dithiol mechanism as part of the cellular defense against oxidative stress. Recently identified monothiol glutaredoxins, which must use a different functional mechanism, appear to be essential in both Escherichia coli and yeast and are well conserved in higher order genomes. We have employed high resolution NMR to determine the three-dimensional solution structure of a monothiol glutaredoxin, the reduced E. coli Grx4. The Grx4 structure comprises a glutaredoxin-like alpha-beta fold, founded on a limited set of strictly conserved and structurally critical residues. A tight hydrophobic core, together with a stringent set of secondary structure elements, is thus likely to be present in all monothiol glutaredoxins. A set of exposed and conserved residues form a surface region, implied in glutathione binding from a known structure of E. coli Grx3. The absence of glutaredoxin activity in E. coli Grx4 can be understood based on small but significant differences in the glutathione binding region, and through the lack of a conserved second GSH binding site. MALDI experiments suggest that disulfide formation on glutathionylation is accompanied by significant structural changes, in contrast with dithiol thioredoxins and glutaredoxins, where differences between oxidized and reduced forms are subtle and local. Structural and functional implications are discussed with particular emphasis on identifying common monothiol glutaredoxin properties in substrate specificity and ligand binding events, linking the thioredoxin and glutaredoxin systems.
Molecular mapping of functionalities in the solution structure of reduced Grx4, a monothiol glutaredoxin from Escherichia coli.,Fladvad M, Bellanda M, Fernandes AP, Mammi S, Vlamis-Gardikas A, Holmgren A, Sunnerhagen M J Biol Chem. 2005 Jul 1;280(26):24553-61. Epub 2005 Apr 18. PMID:15840565[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Fladvad M, Bellanda M, Fernandes AP, Mammi S, Vlamis-Gardikas A, Holmgren A, Sunnerhagen M. Molecular mapping of functionalities in the solution structure of reduced Grx4, a monothiol glutaredoxin from Escherichia coli. J Biol Chem. 2005 Jul 1;280(26):24553-61. Epub 2005 Apr 18. PMID:15840565 doi:10.1074/jbc.M500679200
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